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Cloning, sequencing, and expression in escherichia coli of OxlT, the oxalate:formate exchange protein of Oxalobacter formigenes.产甲酸草酸杆菌的草酸盐:甲酸盐交换蛋白OxlT在大肠杆菌中的克隆、测序及表达
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本文引用的文献

1
The Transporter Classification Database (TCDB): 2021 update.《转运蛋白分类数据库(TCDB):2021 年更新》。
Nucleic Acids Res. 2021 Jan 8;49(D1):D461-D467. doi: 10.1093/nar/gkaa1004.
2
The Unlimited Potential of Microbial Rhodopsins as Optical Tools.微生物视紫红质作为光学工具的无限潜力。
Biochemistry. 2020 Jan 28;59(3):218-229. doi: 10.1021/acs.biochem.9b00768. Epub 2019 Dec 16.
3
THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: Transporters.《药理学概要 2019/20:转运蛋白》
Br J Pharmacol. 2019 Dec;176 Suppl 1(Suppl 1):S397-S493. doi: 10.1111/bph.14753.
4
The SLC transporter in nutrient and metabolic sensing, regulation, and drug development.溶质载体在营养和代谢感应、调节以及药物研发中的作用。
J Mol Cell Biol. 2019 Jan 1;11(1):1-13. doi: 10.1093/jmcb/mjy052.
5
Conversion of microbial rhodopsins: insights into functionally essential elements and rational protein engineering.微生物视紫红质的转化:对功能必需元件及合理蛋白质工程的见解
Biophys Rev. 2017 Dec;9(6):861-876. doi: 10.1007/s12551-017-0335-x. Epub 2017 Nov 25.
6
Spectroscopic characteristics of Rubricoccus marinus xenorhodopsin (RmXeR) and a putative model for its inward H transport mechanism.海红球菌视紫红质(RmXeR)的光谱特性及其向内氢离子转运机制的推测模型。
Phys Chem Chem Phys. 2018 Jan 31;20(5):3172-3183. doi: 10.1039/c7cp05033j.
7
Microbial rhodopsins: wide distribution, rich diversity and great potential.微生物视紫红质:分布广泛、多样性丰富且潜力巨大。
Biophys Physicobiol. 2015 Dec 11;12:121-9. doi: 10.2142/biophysico.12.0_121. eCollection 2015.
8
SLC transporters as therapeutic targets: emerging opportunities.溶质载体转运蛋白作为治疗靶点:新出现的机会
Nat Rev Drug Discov. 2015 Aug;14(8):543-60. doi: 10.1038/nrd4626. Epub 2015 Jun 26.
9
Structural and functional roles of the N- and C-terminal extended modules in channelrhodopsin-1.视紫红质-1中N端和C端延伸模块的结构与功能作用。
Photochem Photobiol Sci. 2015 Sep 26;14(9):1628-36. doi: 10.1039/c5pp00213c. Epub 2015 Jun 22.
10
Liposome reconstitution and transport assay for recombinant transporters.重组转运蛋白的脂质体重建与转运分析
Methods Enzymol. 2015;556:373-83. doi: 10.1016/bs.mie.2014.11.048. Epub 2015 Mar 20.

一种使用共表达光驱动质子泵的大肠杆菌的电致转运体的光遗传学检测方法。

An optogenetic assay method for electrogenic transporters using Escherichia coli co-expressing light-driven proton pump.

机构信息

Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Okayama University, Okayama, Japan.

出版信息

Protein Sci. 2021 Oct;30(10):2161-2169. doi: 10.1002/pro.4154. Epub 2021 Jul 10.

DOI:10.1002/pro.4154
PMID:34216503
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8442964/
Abstract

In organisms, nutrients and wastes move across the cellular membrane, in which membrane-embedded transporters facilitate and inhibit the movement. Despite the physiological significances, the currently used assay methods for transporter activities require tedious preparation and analytical processes. In this study, we report the isotope-free and label-free measurement system for the transport activities of electrogenic transporters. In the system, two molecules, a light-driven inward proton pump rhodopsin, xenorhodopsin (XeR), and a representative of an electrogenic transporter, an oxalate transporter (OxlT), were co-expressed in Escherichia coli cells. The light illumination of the cells co-expressing XeR and OxlT showed an increase in the pH of the bulk solution and that the extent of the pH change is significantly enhanced by adding the oxalate, suggesting the light-induced inward proton transport by XeR coupled to the negative electrogenic transport by OxlT. Such a pH increase was dependent on the oxalate concentration, but not on the XeR expression level. Of note, pH increase was not observed for the nonfunctional mutants of OxlT, R272A, and K355Q, supporting the validity of the system. Thus, we successfully developed an optogenetic assay method for electrogenic transporters using E. coli co-expressing light-driven proton pump.

摘要

在生物体内,营养物质和废物穿过细胞膜,其中膜嵌入的转运蛋白促进和抑制物质的运动。尽管这些转运蛋白具有重要的生理意义,但目前用于转运蛋白活性的检测方法需要繁琐的准备和分析过程。在本研究中,我们报告了一种用于测量电致型转运蛋白转运活性的无同位素和无标记的测量系统。在该系统中,两种分子,即光驱动内向质子泵视紫红质和 Xenorhodopsin(XeR),以及电致型转运蛋白的代表草酸盐转运蛋白(OxlT),在大肠杆菌细胞中共表达。用光照射共表达 XeR 和 OxlT 的细胞,会导致溶液的 pH 值升高,并且添加草酸盐会显著增强 pH 值的变化程度,这表明 XeR 光诱导的内向质子转运与 OxlT 的负电致型转运相偶联。这种 pH 值的增加依赖于草酸盐的浓度,但与 XeR 的表达水平无关。值得注意的是,对于 OxlT 的非功能突变体 R272A 和 K355Q,没有观察到 pH 值的增加,这支持了该系统的有效性。因此,我们成功地使用共表达光驱动质子泵的大肠杆菌开发了一种用于电致型转运蛋白的光遗传学测定方法。