Illite/smectite clay regulating laccase encoded genes to boost lignin decomposition and humus formation in composting habitats revealed by metagenomics analysis.

The aim of this study was to use metagenomics to investigate how Illite/smectite clay (I/S) affected Auxiliary Activities (AA1, AA2, AA3) thereby enhancing lignin decomposition and humification. Metagenomics analysis illustrated that the abundances of AA1, AA2, AA3 in test group (TG) with 10% I/S were 28.98%, 15.18%, 14.36% higher than that in reference group (RG), respectively. Meanwhile, I/S greatly boosted the efficiency of lignin degradation (17.96%) and humus formation (7.16%) compared with RG (13.10%, 3.49%). Furthermore, Actinobacteria was the microorganism with the greatest contribution in RG and TG to secreting AA1 (41.12%, 57.37%), AA2 (62.42%, 65.28%), AA3 (47.04%, 55.47%). Redundancy analysis (RDA) demonstrated that I/S could make the laccase encoding gene-AA1 contribute more to HS formation relative to AA2 and AA3. In conclusion, applying I/S in cattle manure composting effectively improved the abundance, bioavailability of lignin degradation functional gene enzymes and the composting efficiency.