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开发一种基于智能手机的侧流成像系统,该系统使用机器学习分类器检测沙门氏菌属。

Development of a smartphone-based lateral-flow imaging system using machine-learning classifiers for detection of Salmonella spp.

作者信息

Min Hyun Jung, Mina Hansel A, Deering Amanda J, Bae Euiwon

机构信息

Applied Optics Laboratory, School of Mechanical Engineering, West Lafayette, IN 47907, USA.

Department of Food Science, West Lafayette, IN 47907, USA.

出版信息

J Microbiol Methods. 2021 Sep;188:106288. doi: 10.1016/j.mimet.2021.106288. Epub 2021 Jul 17.

Abstract

Salmonella spp. are a foodborne pathogen frequently found in raw meat, egg products, and milk. Salmonella is responsible for numerous outbreaks, becoming a frequent major public-health concern. Many studies have recently reported handheld and rapid devices for microbial detection. This study explored a smartphone-based lateral-flow assay analyzer which employed machine-learning algorithms to detect various concentrations of Salmonella spp. from the test line images. When cell numbers are low, a faint test line is difficult to detect, leading to misleading results. Hence, this study focused on the development of a smartphone-based lateral-flow assay (SLFA) to distinguish ambiguous concentrations of test line with higher confidence. A smartphone cradle was designed with an angled slot to maximize the intensity, and the optimal direction of the optimal incident light was found. Furthermore, the combination of color spaces and the machine-learning algorithms were applied to the SLFA for classifications. It was found that the combination of Lab and RGB color space with SVM and KNN classifiers achieved the high accuracy (95.56%). A blind test was conducted to evaluate the performance of devices; the results by machine-learning techniques reported less error than visual inspection. The smartphone-based lateral-flow assay provided accurate interpretation with a detection limit of 5 × 10 CFU/mL commercially available lateral-flow assays.

摘要

沙门氏菌属是一种常见于生肉、蛋类产品和牛奶中的食源性病原体。沙门氏菌导致了众多疫情爆发,成为一个频繁出现的重大公共卫生问题。最近许多研究报道了用于微生物检测的手持式快速设备。本研究探索了一种基于智能手机的侧流分析分析仪,该分析仪采用机器学习算法从测试线图像中检测不同浓度的沙门氏菌属。当细胞数量较少时,微弱的测试线很难检测到,从而导致误导性结果。因此,本研究专注于开发一种基于智能手机的侧流分析(SLFA),以更可靠地区分测试线的模糊浓度。设计了一个带有倾斜插槽的智能手机支架,以最大化光强,并找到了最佳入射光的最佳方向。此外,将颜色空间和机器学习算法的组合应用于SLFA进行分类。发现Lab和RGB颜色空间与支持向量机(SVM)和K近邻(KNN)分类器的组合实现了高精度(95.56%)。进行了一项盲测以评估设备的性能;机器学习技术得出的结果比目视检查的误差更小。基于智能手机的侧流分析提供了准确的解读,检测限为5×10 CFU/mL,优于市售的侧流分析。

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