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阴离子中烷基链和电负性原子对羧酸苯胺盐生物活性离子液体生物活性的影响以及基于密度泛函理论(DFT)和分子对接的计算方法

The effect of alkyl chain and electronegative atoms in anion on biological activity of anilinium carboxylate bioactive ionic liquids and computational approaches by DFT functional and molecular docking.

作者信息

Kumer Ajoy, Khan Md Wahab

机构信息

Organic Research Laboratory, Department of Chemistry, Bangladesh University of Engineering and Technology (BUET), Dhaka, 1000, Bangladesh.

出版信息

Heliyon. 2021 Jul 8;7(7):e07509. doi: 10.1016/j.heliyon.2021.e07509. eCollection 2021 Jul.

DOI:10.1016/j.heliyon.2021.e07509
PMID:34296013
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8282962/
Abstract

The Brønsted acid-base neutralization was executed for synthesis of the anilinium carboxylate ionic liquids (ACILs), and obtained highly viscous liquids with yields about (90-94)%. These ILs were purified by distillation process and used vacuum oven, as well as characterized by FT-IR, UV spectroscopy and 1H-NMR. To evaluate the antimicrobial activity, the well diffusion method was used against eight human pathogenic bacteria, showing inhibition of zone at 13 mm-27 mm, and three fungi with result about 60%. Plus, the DFT functional from material studio 8.0 was used for evaluation of computational screening for estimating the chemical reactivity, HOMO, LUMO and HOMO-LUMO gap, recorded from -7.252 to -8.20 kcal/mol. The IL05 has showed about -6.5 kcal/mol docking score as standard inhibitor, as and higher than starting. Form AMDET properties, it has revealed that they have low toxicity, higher absorption through the biological system and non-carcinogenic. Finally, the electronegative groups, such as F, Cl and Br atoms in anion can show the higher antimicrobial activity and molecular docking score among all others while F atom containing IL05 shows the highest docking score and antimicrobial activity. However, it is concluded that rather than long large alkyl chain of anion, F atom (the highest electronegative atom) containing anion is better for biologically significance ILs.

摘要

通过布朗斯特酸碱中和反应合成了羧酸苯胺离子液体(ACILs),得到了高粘性液体,产率约为(90 - 94)%。这些离子液体通过蒸馏过程进行纯化,并使用真空烘箱,同时通过傅里叶变换红外光谱(FT - IR)、紫外光谱和核磁共振氢谱(1H - NMR)进行表征。为了评估抗菌活性,采用滤纸片扩散法对八种人类病原菌进行测试,抑菌圈直径为13 mm - 27 mm,对三种真菌的抑菌率约为60%。此外,使用材料工作室8.0中的密度泛函理论(DFT)功能来评估计算筛选,以估计化学反应性、最高占据分子轨道(HOMO)、最低未占据分子轨道(LUMO)和HOMO - LUMO能隙,记录值为 - 7.252至 - 8.20千卡/摩尔。IL05作为标准抑制剂显示出约 - 6.5千卡/摩尔的对接分数,高于起始值。从AMDET性质来看,它们显示出低毒性、在生物系统中具有较高的吸收性且无致癌性。最后,阴离子中的电负性基团,如F、Cl和Br原子,在所有其他基团中表现出更高的抗菌活性和分子对接分数,而含F原子的IL05显示出最高的对接分数和抗菌活性。然而,可以得出结论,对于具有生物学意义的离子液体而言,含F原子(电负性最高的原子)的阴离子比长的大烷基链阴离子更好。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/43200aed4b62/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/18bb0ce7354e/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/a85850b72a68/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/defce348639b/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/43200aed4b62/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/18bb0ce7354e/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/a85850b72a68/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/defce348639b/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c39/8282962/43200aed4b62/gr4.jpg

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