Enudi Obieze C, Louis Hitler, Edim Moses M, Agwupuye John A, Ekpen Francis O, Bisong Emmanuel A, Utsu Patrick M
Computational and Bio-Simulation Research Group, University of Calabar, Calabar, Nigeria.
Heliyon. 2021 Jul 10;7(7):e07531. doi: 10.1016/j.heliyon.2021.e07531. eCollection 2021 Jul.
The inter-fragment interactions at various binding sites and the overall cluster stability of quinolone (QNOL), cinnoline (CNOL), quinazoline (QNAZ), and quinoxaline (QNOX) complexes with HO were studied using the density functional theory (DFT) approach. The adsorption and H-bond binding energies, and the energy decomposition mechanism was considered to determine the relative stabilization status of the studied clusters. Scanning tunneling microscopy (STM), natural bonding orbitals (NBO) and charge decomposition were studied to expose the electronic distribution and interaction between fragments. The feasibility of formations of the various complexes were also studied by considering their thermodynamic properties. Results from adsorption studies confirmed the actual adsorption of HO molecules on the various binding sites studied, with QNOX clusters exhibiting the best adsorptions. Charge decomposition analysis (CDA) revealed significant charge transfer from substrate to HO fragment in most complexes, except in QNOL, CNOL and QNAZ clusters with HO at binding position 4, where much charges are back-donated to substrate. The O---H inter-fragment bonds was discovered to be stronger than counterpart N---H bonds in the complexes, whilst polarity indices confirmed N---H as more polar covalent than O---H bonds. Thermodynamic considerations revealed that the formation process of all studied complexes are endothermic (+ve Δ ) and non-spontaneous (+ve Δ ).
采用密度泛函理论(DFT)方法研究了喹诺酮(QNOL)、噌啉(CNOL)、喹唑啉(QNAZ)和喹喔啉(QNOX)与HO形成的配合物在不同结合位点的片段间相互作用以及整体簇稳定性。考虑吸附和氢键结合能以及能量分解机制来确定所研究簇的相对稳定状态。通过扫描隧道显微镜(STM)、自然键轨道(NBO)和电荷分解研究,揭示片段间的电子分布和相互作用。还通过考虑各种配合物的热力学性质来研究其形成的可行性。吸附研究结果证实了HO分子在研究的不同结合位点上的实际吸附,其中QNOX簇表现出最佳吸附效果。电荷分解分析(CDA)表明,在大多数配合物中,存在从底物到HO片段的显著电荷转移,但在结合位置4处含有HO的QNOL、CNOL和QNAZ簇中,有大量电荷回授到底物上。发现配合物中O---H片段间键比相应的N---H键更强,而极性指数证实N---H键比O---H键更具极性共价性。热力学分析表明,所有研究配合物的形成过程都是吸热的(Δ 为正值)且是非自发的(Δ 为正值)。