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留一验证法评估精神分裂症患者磁共振成像多变量回归的稳定性和可靠性。

Hold-out validation for the assessment of stability and reliability of multivariable regression demonstrated with magnetic resonance imaging of patients with schizophrenia.

机构信息

Department of Computer Science, St. Francis Xavier University, Antigonish, Nova Scotia, Canada.

Canada Research Chair in Bioinformatics, St. Francis Xavier University, Antigonish, Nova Scotia, Canada.

出版信息

Int J Dev Neurosci. 2021 Nov;81(7):655-662. doi: 10.1002/jdn.10144. Epub 2021 Aug 9.

Abstract

Neuroscience studies are very often tasked with identifying measurable differences between two groups of subjects, typically one group with a pathological condition and one group representing control subjects. It is often expected that the measurements acquired for comparing groups are also affected by a variety of additional patient characteristics such as sex, age, and comorbidities. Multivariable regression (MVR) is a statistical analysis technique commonly employed in neuroscience studies to "control for" or "adjust for" secondary effects (such as sex, age, and comorbidities) in order to ensure that the main study findings are focused on actual differences between the groups of interest associated with the condition under investigation. It is common practice in the neuroscience literature to utilize MVR to control for secondary effects; however, at present, it is not typically possible to assess whether the MVR adjustments correct for more error than they introduce. In common neuroscience practice, MVR models are not validated and no attempt to characterize deficiencies in the MVR model is made. In this article, we demonstrate how standard hold-out validation techniques (commonly used in machine learning analyses) that involve repeatedly randomly dividing datasets into training and testing samples can be adapted to the assessment of stability and reliability of MVR models with a publicly available neurological magnetic resonance imaging (MRI) dataset of patients with schizophrenia. Results demonstrate that MVR can introduce measurement error up to 30.06% and, on average across all considered measurements, introduce 9.84% error on this dataset. When hold-out validated MVR does not agree with the results of the standard use of MVR, the use of MVR in the given application is unstable. Thus, this paper helps evaluate the extent to which the simplistic use of MVR introduces study error in neuroscientific analyses with an analysis of patients with schizophrenia.

摘要

神经科学研究通常需要确定两组研究对象之间可衡量的差异,通常一组为有病理状况的患者,另一组为对照组。通常预期用于比较组的测量值也受到各种其他患者特征的影响,例如性别、年龄和合并症。多变量回归 (MVR) 是神经科学研究中常用的统计分析技术,用于“控制”或“调整”次要效应(如性别、年龄和合并症),以确保主要研究结果集中于与研究条件相关的感兴趣组之间的实际差异。在神经科学文献中,普遍采用 MVR 来控制次要效应;然而,目前通常不可能评估 MVR 调整是否引入的错误多于纠正的错误。在常见的神经科学实践中,不验证 MVR 模型,也不尝试描述 MVR 模型的缺陷。在本文中,我们展示了如何将标准留一验证技术(常用于机器学习分析),即重复随机将数据集分为训练和测试样本,应用于评估 MVR 模型的稳定性和可靠性,该模型使用了一个公开的精神分裂症患者的神经磁共振成像 (MRI) 数据集。结果表明,MVR 可引入高达 30.06%的测量误差,并且在该数据集上,平均而言,MVR 会引入 9.84%的误差。当留一验证的 MVR 与标准 MVR 的结果不一致时,给定应用程序中 MVR 的使用是不稳定的。因此,本文通过对精神分裂症患者的分析,有助于评估在神经科学分析中简单使用 MVR 引入研究误差的程度。

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