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使用图像域深度单应性回归进行并行磁共振数据的重建与分割

RECONSTRUCTION AND SEGMENTATION OF PARALLEL MR DATA USING IMAGE DOMAIN DEEP-SLR.

作者信息

Pramanik Aniket, Jacob Mathews

机构信息

The University of Iowa, Iowa City, USA.

出版信息

Proc IEEE Int Symp Biomed Imaging. 2021 Apr;2021. doi: 10.1109/isbi48211.2021.9434056. Epub 2021 May 25.

DOI:10.1109/isbi48211.2021.9434056
PMID:34354795
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8330410/
Abstract

The main focus of this work is a novel framework for the joint reconstruction and segmentation of parallel MRI (PMRI) brain data. We introduce an image domain deep network for calibrationless recovery of undersampled PMRI data. The proposed approach is the deep-learning (DL) based generalization of local low-rank based approaches for uncalibrated PMRI recovery including CLEAR [6]. Since the image domain approach exploits additional annihilation relations compared to k-space based approaches, we expect it to offer improved performance. To minimize segmentation errors resulting from undersampling artifacts, we combined the proposed scheme with a segmentation network and trained it in an end-to-end fashion. In addition to reducing segmentation errors, this approach also offers improved reconstruction performance by reducing overfitting; the reconstructed images exhibit reduced blurring and sharper edges than independently trained reconstruction network.

摘要

这项工作的主要重点是用于并行磁共振成像(PMRI)脑数据联合重建与分割的新型框架。我们引入了一种图像域深度网络,用于欠采样PMRI数据的无校准恢复。所提出的方法是基于深度学习(DL)的对包括CLEAR [6]在内的用于未校准PMRI恢复的基于局部低秩方法的推广。由于与基于k空间的方法相比,图像域方法利用了额外的消除关系,我们期望它能提供更好的性能。为了最小化由欠采样伪影导致的分割误差,我们将所提出的方案与分割网络相结合,并以端到端的方式进行训练。除了减少分割误差外,这种方法还通过减少过拟合提供了更好的重建性能;与独立训练的重建网络相比,重建图像的模糊度降低且边缘更清晰。

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Structured Low-Rank Algorithms: Theory, Magnetic Resonance Applications, and Links to Machine Learning.结构化低秩算法:理论、磁共振应用及与机器学习的联系
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Deep Generalization of Structured Low-Rank Algorithms (Deep-SLR).深度结构化低秩算法的广泛应用(Deep-SLR)。
IEEE Trans Med Imaging. 2020 Dec;39(12):4186-4197. doi: 10.1109/TMI.2020.3014581. Epub 2020 Nov 30.
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