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基于线粒体基因组对七鳃蜉科(昆虫纲:蜉蝣目)三个亚科系统发育关系的洞察及低温选择压力分析

Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes.

作者信息

Xu Xiao-Dong, Guan Jia-Yin, Zhang Zi-Yi, Cao Yu-Rou, Cai Yin-Yin, Storey Kenneth B, Yu Dan-Na, Zhang Jia-Yong

机构信息

College of Chemistry and Life Science, Zhejiang Normal University, Jinhua 321004, China.

Department of Biology, Carleton University, Ottawa, ON K1S 5B6, Canada.

出版信息

Insects. 2021 Jul 19;12(7):656. doi: 10.3390/insects12070656.

Abstract

We determined 15 complete and two nearly complete mitogenomes of Heptageniidae belonging to three subfamilies (Heptageniinae, Rhithrogeninae, and Ecdyonurinae) and six genera (, , , , , and ). Species of Rhithrogeninae and Ecdyonurinae had the same gene rearrangement of CR, whereas a novel gene rearrangement of CR--NCR- was found in Heptageniinae. Non-coding regions (NCRs) of 25-47 bp located between and were observed in all mayflies of Heptageniidae, which may be a synapomorphy for Heptageniidae. Both the BI and ML phylogenetic analyses supported the monophyly of Heptageniidae and its subfamilies (Heptageniinae, Rhithrogeninae, and Ecdyonurinae). The phylogenetic results combined with gene rearrangements and NCR locations confirmed the relationship of the subfamilies as (Heptageniinae + (Rhithrogeninae + Ecdyonurinae)). To assess the effects of low-temperature stress on Heptageniidae species from Ottawa, Canada, we found 27 positive selection sites in eight protein-coding genes (PCGs) using the branch-site model. The selection pressure analyses suggested that mitochondrial PCGs underwent positive selection to meet the energy requirements under low-temperature stress.

摘要

我们测定了属于三个亚科(河花蜉亚科、原石蜉亚科和埃蜉亚科)和六个属(……此处原文六个属名缺失……)的15个完整和2个近乎完整的扁蜉科线粒体基因组。原石蜉亚科和埃蜉亚科的物种具有相同的控制区(CR)基因重排,而在河花蜉亚科中发现了一种新的CR--NCR-基因重排。在所有扁蜉科蜉蝣中均观察到位于……此处原文缺失相关基因位置……之间的25 - 47 bp的非编码区(NCRs),这可能是扁蜉科的一个共衍征。贝叶斯推断(BI)和最大似然法(ML)系统发育分析均支持扁蜉科及其亚科(河花蜉亚科、原石蜉亚科和埃蜉亚科)的单系性。系统发育结果结合基因重排和NCR位置证实了亚科之间的关系为(河花蜉亚科 + (原石蜉亚科 + 埃蜉亚科))。为了评估低温胁迫对来自加拿大渥太华的扁蜉科物种 的影响,我们使用分支位点模型在八个蛋白质编码基因(PCGs)中发现了27个正选择位点。选择压力分析表明线粒体PCGs经历了正选择以满足低温胁迫下的能量需求。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d7c6/8307263/1691f2d3fb17/insects-12-00656-g001.jpg

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