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丝裂原活化蛋白激酶表达谱揭示了其在调节马铃薯应激反应中的作用()。 (原文括号处内容缺失,译文保留括号)

Mitogen-Activated Protein Kinase Expression Profiling Revealed Its Role in Regulating Stress Responses in Potato ().

作者信息

Zaynab Madiha, Hussain Athar, Sharif Yasir, Fatima Mahpara, Sajid Mateen, Rehman Nazia, Yang Xuewei, Khan Khalid Ali, Ghramh Hamed A, Li Shuangfei

机构信息

Shenzhen Key Laboratory of Marine Bioresource & Eco-Environmental Sciences, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 51807, China.

Genomics Lab, Department of Life Science, University of Management and Technology (UMT), Lahore 54770, Pakistan.

出版信息

Plants (Basel). 2021 Jul 5;10(7):1371. doi: 10.3390/plants10071371.

Abstract

Mitogen-activated protein kinase (MAPK) cascades are the universal signal transduction networks that regulate cell growth and development, hormone signaling, and other environmental stresses. However, their essential contribution to plant tolerance is very little known in the potato () plant. The current study carried out a genome-wide study of and provided a deep insight using bioinformatics tools. In addition, the relative expression of was also assessed in different plant tissues. The similarity search results identified a total of 22 genes in the potato genome. The sequence alignment also showed conserved motif TEY/TDY in most StMAPKs with conserved docking LHDXXEP sites. The phylogenetic analysis divided all 22 genes into five groups, i.e., A, B, C, D, and E, showing some common structural motifs. In addition, most of the were found in a cluster form at the terminal of chromosomes. The promoter analysis predicted several stress-responsive -acting regulatory elements in genes. Gene duplication under selection pressure also indicated several purifying and positive selections in genes. In potato, , , and showed a high expression in response to heat stress. Under ABA and IAA treatment, the expression of the total 20 genes revealed that ABA and IAA played an essential role in this defense process. The expression profiling and real-time qPCR (RT-qPCR) exhibited their high expression in roots and stems compared to leaves. These results deliver primary data for functional analysis and provide reference data for other important crops.

摘要

丝裂原活化蛋白激酶(MAPK)级联是调节细胞生长发育、激素信号传导及其他环境胁迫的通用信号转导网络。然而,它们对马铃薯植株耐受性的重要贡献却鲜为人知。当前研究对马铃薯进行了全基因组研究,并使用生物信息学工具进行了深入分析。此外,还评估了马铃薯中相关基因在不同植物组织中的相对表达。相似性搜索结果在马铃薯基因组中总共鉴定出22个MAPK基因。序列比对还显示,大多数马铃薯MAPK中存在保守基序TEY/TDY以及保守的对接LHDXXEP位点。系统发育分析将所有22个MAPK基因分为A、B、C、D和E五组,显示出一些共同的结构基序。此外,大多数MAPK基因以簇状形式位于染色体末端。启动子分析预测了MAPK基因中几个应激反应顺式作用调控元件。选择压力下的基因复制也表明MAPK基因存在一些纯化选择和正选择。在马铃薯中,StMAPK3、StMAPK4和StMAPK6对热胁迫表现出高表达。在脱落酸(ABA)和吲哚乙酸(IAA)处理下,20个MAPK基因的表达表明ABA和IAA在这一防御过程中发挥了重要作用。表达谱分析和实时定量PCR(RT-qPCR)显示,与叶片相比,它们在根和茎中高表达。这些结果为功能分析提供了原始数据,并为其他重要作物提供了参考数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b6c/8309457/8b88438806fe/plants-10-01371-g001.jpg

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