Jeyasri Rajendran, Muthuramalingam Pandiyan, Satish Lakkakula, Pandian Shunmugiah Karutha, Chen Jen-Tsung, Ahmar Sunny, Wang Xiukang, Mora-Poblete Freddy, Ramesh Manikandan
Department of Biotechnology, Science Campus, Alagappa University, Karaikudi 630003, India.
Department of Biotechnology, Sri Shakthi Institute of Engineering and Technology, Coimbatore 641062, India.
Plants (Basel). 2021 Jul 19;10(7):1472. doi: 10.3390/plants10071472.
Abiotic stresses (AbS), such as drought, salinity, and thermal stresses, could highly affect the growth and development of plants. For decades, researchers have attempted to unravel the mechanisms of AbS for enhancing the corresponding tolerance of plants, especially for crop production in agriculture. In the present communication, we summarized the significant factors (atmosphere, soil and water) of AbS, their regulations, and integrated omics in the most important cereal crops in the world, especially rice, wheat, sorghum, and maize. It has been suggested that using systems biology and advanced sequencing approaches in genomics could help solve the AbS response in cereals. An emphasis was given to holistic approaches such as, bioinformatics and functional omics, gene mining and agronomic traits, genome-wide association studies (GWAS), and transcription factors (TFs) family with respect to AbS. In addition, the development of omics studies has improved to address the identification of AbS responsive genes and it enables the interaction between signaling pathways, molecular insights, novel traits and their significance in cereal crops. This review compares AbS mechanisms to omics and bioinformatics resources to provide a comprehensive view of the mechanisms. Moreover, further studies are needed to obtain the information from the integrated omics databases to understand the AbS mechanisms for the development of large spectrum AbS-tolerant crop production.
非生物胁迫,如干旱、盐碱化和热胁迫,会对植物的生长和发育产生重大影响。几十年来,研究人员一直试图揭示非生物胁迫的机制,以提高植物的相应耐受性,特别是在农业作物生产方面。在本通讯中,我们总结了非生物胁迫的重要因素(大气、土壤和水)、它们的调控以及世界上最重要的谷类作物,特别是水稻、小麦、高粱和玉米中的综合组学。有人提出,在基因组学中使用系统生物学和先进的测序方法有助于解决谷类作物对非生物胁迫的响应。重点介绍了整体方法,如生物信息学和功能组学、基因挖掘和农艺性状、全基因组关联研究(GWAS)以及与非生物胁迫相关的转录因子(TFs)家族。此外,组学研究的发展已改进到能够识别非生物胁迫响应基因,并能揭示信号通路之间的相互作用、分子见解、新性状及其在谷类作物中的意义。本综述将非生物胁迫机制与组学和生物信息学资源进行比较,以提供对这些机制的全面认识。此外,还需要进一步研究,从综合组学数据库中获取信息,以了解非生物胁迫机制,从而开发出具有广谱非生物胁迫耐受性的作物生产。