Department of Computer Science, University of Cape Town, 18 University Avenue, Cape Town, 7700, South Africa.
Swiss Federal Research Institute WSL, Zürcherstrasse 111, Birmensdorf, CH-8903, Switzerland.
J Biomed Semantics. 2021 Aug 9;12(1):15. doi: 10.1186/s13326-021-00246-0.
The ontology authoring step in ontology development involves having to make choices about what subject domain knowledge to include. This may concern sorting out ontological differences and making choices between conflicting axioms due to limitations in the logic or the subject domain semantics. Examples are dealing with different foundational ontologies in ontology alignment and OWL 2 DL's transitive object property versus a qualified cardinality constraint. Such conflicts have to be resolved somehow. However, only isolated and fragmented guidance for doing so is available, which therefore results in ad hoc decision-making that may not be the best choice or forgotten about later.
This work aims to address this by taking steps towards a framework to deal with the various types of modeling conflicts through meaning negotiation and conflict resolution in a systematic way. It proposes an initial library of common conflicts, a conflict set, typical steps toward resolution, and the software availability and requirements needed for it. The approach was evaluated with an actual case of domain knowledge usage in the context of epizootic disease outbreak, being avian influenza, and running examples with COVID-19 ontologies.
The evaluation demonstrated the potential and feasibility of a conflict resolution framework for ontologies.
本体开发中的本体创作步骤涉及到必须做出关于包含哪些主题领域知识的选择。这可能涉及到由于逻辑或主题领域语义的限制而理清本体差异并在冲突的公理之间做出选择。例如,在本体对齐中处理不同的基础本体和 OWL 2 DL 的传递对象属性与限定基数约束之间存在冲突。必须以某种方式解决这些冲突。但是,目前只有孤立和零散的指导意见,因此导致了临时决策,这可能不是最佳选择,或者以后会被遗忘。
本工作旨在通过采取措施,通过在系统中通过意义协商和冲突解决来处理各种类型的建模冲突,从而解决这一问题。它提出了一个常见冲突的初始库、一个冲突集、典型的解决步骤,以及所需的软件可用性和要求。该方法在涉及到禽流感等疫病爆发的实际领域知识使用情况下进行了评估,并对 COVID-19 本体进行了运行示例。
评估表明了本体冲突解决框架的潜力和可行性。