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(麦克莱兰,1839年)的线粒体全基因组特征分析 。

Characterization of the complete mitochondrial genome of (McClelland, 1839).

作者信息

Singh Shubra, Mishra Archana, Pavan-Kumar Annam, Bidyasagar Singh Sanjenbam, Radhakrishnan K V, Nagpure N S, Chaudhari Aparna

机构信息

Division of Fish Genetics and Biotechnology, ICAR - Central Institute of Fisheries Education Versova, Mumbai, India.

College of Fisheries Science, Central Agricultural University, Lembucherra, Agartala, India.

出版信息

Mitochondrial DNA B Resour. 2021 Jul 27;6(9):2461-2463. doi: 10.1080/23802359.2021.1920505. eCollection 2021.

DOI:10.1080/23802359.2021.1920505
PMID:34377797
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8330796/
Abstract

The complete mitochondrial genome of the near threatened mahseer fish, , was characterized for the first-time using Ion Torrent NGS platform. The total length of the mitogenome was 16,538 bp including a standard set of 22 transfer RNAs (tRNAs), 2 ribosomal RNAs (rRNAs), 13 protein-coding genes and a non-coding control region. Twenty-eight of the 37 genes are located on the light strand and, the remaining nine genes are situated on the heavy strand. Phylogenetic analysis showed the sister relationship between and The mitogenome could be useful for phylogenetics, population genetics, and conservation of the mahseers.

摘要

首次使用Ion Torrent NGS平台对近危的马西亚鱼的完整线粒体基因组进行了表征。线粒体基因组全长16,538 bp,包括一组标准的22个转移RNA(tRNA)、2个核糖体RNA(rRNA)、13个蛋白质编码基因和一个非编码控制区。37个基因中的28个位于轻链上,其余9个基因位于重链上。系统发育分析显示了[具体物种1]和[具体物种2]之间的姐妹关系。该线粒体基因组可能对马西亚鱼的系统发育学、群体遗传学和保护研究有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a691/8330796/5a02f5f672ab/TMDN_A_1920505_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a691/8330796/5a02f5f672ab/TMDN_A_1920505_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a691/8330796/5a02f5f672ab/TMDN_A_1920505_F0001_B.jpg

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本文引用的文献

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The species dilemma of Northeast Indian Mahseer (Actinopterygii: Cyprinidae): DNA barcoding in clarifying the riddle.东北印度雅罗鱼(硬骨鱼纲:鲤科)的物种困境:DNA 条形码解开谜团。
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Gene. 2004 Jul 21;336(2):147-53. doi: 10.1016/j.gene.2004.04.009.