单细胞转录组分析揭示了人类免疫细胞在早期胎儿皮肤发育过程中的动态变化。
Single-cell transcriptome analysis reveals the dynamics of human immune cells during early fetal skin development.
机构信息
Experimental Research Center, Dermatology Hospital, Southern Medical University, Guangzhou 510091, China.
Experimental Research Center, Dermatology Hospital, Southern Medical University, Guangzhou 510091, China.
出版信息
Cell Rep. 2021 Aug 10;36(6):109524. doi: 10.1016/j.celrep.2021.109524.
The immune system of skin develops in stages in mice. However, the developmental dynamics of immune cells in human skin remains elusive. Here, we perform transcriptome profiling of CD45 hematopoietic cells in human fetal skin at an estimated gestational age of 10-17 weeks by single-cell RNA sequencing. A total of 13 immune cell types are identified. Skin macrophages show dynamic heterogeneity over the course of skin development. A major shift in lymphoid cell developmental states occurs from the first to the second trimester that implies an in situ differentiation process. Gene expression analysis reveals a typical developmental program in immune cells in accordance with their functional maturation, possibly involving metabolic reprogramming. Finally, we identify transcription factors (TFs) that potentially regulate cellular transitions by comparing TFs and TF target gene networks. These findings provide detailed insight into how the immune system of the human skin is established during development.
皮肤的免疫系统在老鼠体内分阶段发育。然而,人类皮肤中免疫细胞的发育动态仍然难以捉摸。在这里,我们通过单细胞 RNA 测序对估计胎龄为 10-17 周的人类胎儿皮肤中的 CD45 造血细胞进行转录组谱分析。总共鉴定出 13 种免疫细胞类型。皮肤巨噬细胞在皮肤发育过程中表现出动态异质性。从第一个到第二个三个月龄,淋巴样细胞发育状态发生了重大转变,这意味着存在原位分化过程。基因表达分析揭示了免疫细胞中与功能成熟相一致的典型发育程序,可能涉及代谢重编程。最后,我们通过比较转录因子(TFs)和 TF 靶基因网络,确定了可能调节细胞转化的转录因子(TFs)。这些发现为了解人类皮肤免疫系统在发育过程中是如何建立的提供了详细的见解。