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嵴形态对线粒体ATP输出的影响:一项计算研究。

Effect of crista morphology on mitochondrial ATP output: A computational study.

作者信息

Afzal Nasrin, Lederer W Jonathan, Jafri M Saleet, Mannella Carmen A

机构信息

Krasnow Institute for Advanced Study and School of Systems Biology, George Mason University, Fairfax, VA, 22030, USA.

Center for Biomedical Engineering and Technology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.

出版信息

Curr Res Physiol. 2021;4:163-176. doi: 10.1016/j.crphys.2021.03.005. Epub 2021 Apr 1.

DOI:10.1016/j.crphys.2021.03.005
PMID:34396153
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8360328/
Abstract

Folding of the mitochondrial inner membrane (IM) into cristae greatly increases the ATP-generating surface area, , per unit volume but also creates diffusional bottlenecks that could limit reaction rates inside mitochondria. This study explores possible effects of inner membrane folding on mitochondrial ATP output, using a mathematical model for energy metabolism developed by the Jafri group and two- and three-dimensional spatial models for mitochondria, implemented on the Virtual Cell platform. Simulations demonstrate that cristae are micro-compartments functionally distinct from the cytosol. At physiological steady states, standing gradients of ADP form inside cristae that depend on the size and shape of the compartments, and reduce local flux (rate per unit area) of the adenine nucleotide translocase. This causes matrix ADP levels to drop, which in turn reduces the flux of ATP synthase. The adverse effects of membrane folding on reaction fluxes increase with crista length and are greater for lamellar than tubular crista. However, total ATP output per mitochondrion is the product of flux of ATP synthase and which can be two-fold greater for mitochondria with lamellar than tubular cristae, resulting in greater ATP output for the former. The simulations also demonstrate the crucial role played by intracristal kinases (adenylate kinase, creatine kinase) in maintaining the energy advantage of IM folding.

摘要

线粒体内膜(IM)折叠形成嵴,极大地增加了每单位体积产生ATP的表面积,但也造成了扩散瓶颈,可能会限制线粒体内的反应速率。本研究利用Jafri团队开发的能量代谢数学模型以及在虚拟细胞平台上实现的线粒体二维和三维空间模型,探讨内膜折叠对线粒体ATP输出的可能影响。模拟结果表明,嵴是功能上与细胞质不同的微区室。在生理稳态下,嵴内形成的ADP稳态梯度取决于区室的大小和形状,并降低腺嘌呤核苷酸转位酶的局部通量(单位面积速率)。这导致基质ADP水平下降,进而降低ATP合酶的通量。膜折叠对反应通量的不利影响随嵴长度增加而增大,片状嵴比管状嵴的影响更大。然而,每个线粒体的总ATP输出量是ATP合酶通量的产物,片状嵴线粒体的总ATP输出量可比管状嵴线粒体高出两倍,因此前者的ATP输出量更大。模拟结果还表明,嵴内激酶(腺苷酸激酶、肌酸激酶)在维持内膜折叠的能量优势方面发挥着关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/d067bfcb3fe0/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/b4d9812552cf/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/dba594ecf532/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/a46429c88d30/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/63898d93cff7/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/2ee650ebd5a9/gr4a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/d82dc53d4b55/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/b28bc3d07438/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/f3150348da67/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/61fe32caa3c9/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/d067bfcb3fe0/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/b4d9812552cf/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/dba594ecf532/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/a46429c88d30/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/63898d93cff7/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/2ee650ebd5a9/gr4a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/d82dc53d4b55/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/b28bc3d07438/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/f3150348da67/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/61fe32caa3c9/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b687/8562192/d067bfcb3fe0/fx1.jpg

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