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ABCC4 基因与金毛寻回犬的子宫蓄脓有关。

The ABCC4 gene is associated with pyometra in golden retriever dogs.

机构信息

Faculty of Health and Medical Sciences, Department of Veterinary Clinical Sciences, University of Copenhagen, Copenhagen, Denmark.

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.

出版信息

Sci Rep. 2021 Aug 17;11(1):16647. doi: 10.1038/s41598-021-95936-1.

DOI:10.1038/s41598-021-95936-1
PMID:34404837
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8370986/
Abstract

Pyometra is one of the most common diseases in female dogs, presenting as purulent inflammation and bacterial infection of the uterus. On average 20% of intact female dogs are affected before 10 years of age, a proportion that varies greatly between breeds (3-66%). The clear breed predisposition suggests that genetic risk factors are involved in disease development. To identify genetic risk factors associated with the disease, we performed a genome-wide association study (GWAS) in golden retrievers, a breed with increased risk of developing pyometra (risk ratio: 3.3). We applied a mixed model approach comparing 98 cases, and 96 healthy controls and identified an associated locus on chromosome 22 (p = 1.2 × 10, passing Bonferroni corrected significance). This locus contained five significantly associated SNPs positioned within introns of the ATP-binding cassette transporter 4 (ABCC4) gene. This gene encodes a transmembrane transporter that is important for prostaglandin transport. Next generation sequencing and genotyping of cases and controls subsequently identified four missense SNPs within the ABCC4 gene. One missense SNP at chr22:45,893,198 (p.Met787Val) showed complete linkage disequilibrium with the associated GWAS SNPs suggesting a potential role in disease development. Another locus on chromosome 18 overlapping the TESMIN gene, is also potentially implicated in the development of the disease.

摘要

子宫蓄脓是母犬最常见的疾病之一,表现为子宫化脓性炎症和细菌感染。平均有 20%未绝育的母犬在 10 岁之前患病,不同品种的发病率差异很大(3-66%)。明显的品种易感性表明,遗传风险因素与疾病的发展有关。为了确定与该疾病相关的遗传风险因素,我们对金毛猎犬进行了全基因组关联研究(GWAS),金毛猎犬患子宫蓄脓的风险较高(风险比:3.3)。我们应用混合模型方法比较了 98 例病例和 96 例健康对照,在第 22 号染色体上发现了一个相关的位点(p=1.2×10,通过了 Bonferroni 校正的显著性)。该位点包含五个位于 ATP 结合盒转运蛋白 4(ABCC4)基因内含子中的显著相关 SNP。该基因编码一种对前列腺素转运很重要的跨膜转运蛋白。随后对病例和对照进行下一代测序和基因分型,在 ABCC4 基因中发现了四个错义 SNP。位于 chr22:45,893,198(p.Met787Val)的一个错义 SNP 与关联的 GWAS SNP 完全连锁不平衡,提示其在疾病发展中可能起作用。18 号染色体上与 TESMIN 基因重叠的另一个位点也可能与疾病的发展有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/df1c4aa59f2a/41598_2021_95936_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/44013d1df318/41598_2021_95936_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/56d8b7ce7444/41598_2021_95936_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/06540609c9ca/41598_2021_95936_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/df1c4aa59f2a/41598_2021_95936_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/44013d1df318/41598_2021_95936_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/56d8b7ce7444/41598_2021_95936_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/06540609c9ca/41598_2021_95936_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d346/8370986/df1c4aa59f2a/41598_2021_95936_Fig4_HTML.jpg

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