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一种植物宿主拟南芥(Nicotiana benthamiana)可促进真菌木质素降解酶的生产和研究。

A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes.

机构信息

Department of Chemical Engineering, Stanford University, Stanford, CA, USA.

U.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.

出版信息

Commun Biol. 2021 Sep 1;4(1):1027. doi: 10.1038/s42003-021-02464-9.

Abstract

Lignin has significant potential as an abundant and renewable source for commodity chemicals yet remains vastly underutilized. Efforts towards engineering a biochemical route to the valorization of lignin are currently limited by the lack of a suitable heterologous host for the production of lignin-degrading enzymes. Here, we show that expression of fungal genes in Nicotiana benthamiana enables production of members from seven major classes of enzymes associated with lignin degradation (23 of 35 tested) in soluble form for direct use in lignin activity assays. We combinatorially characterized a subset of these enzymes in the context of model lignin dimer oxidation, revealing that fine-tuned coupling of peroxide-generators to peroxidases results in more extensive C-C bond cleavage compared to direct addition of peroxide. Comparison of peroxidase isoform activity revealed that the extent of C-C bond cleavage depends on peroxidase identity, suggesting that peroxidases are individually specialized in the context of lignin oxidation. We anticipate the use of N. benthamiana as a platform to rapidly produce a diverse array of fungal lignin-degrading enzymes will facilitate a better understanding of their concerted role in nature and unlock their potential for lignin valorization, including within the plant host itself.

摘要

木质素作为一种丰富且可再生的商品化学品资源具有巨大的潜力,但目前仍未得到充分利用。目前,工程化生物化学途径来实现木质素的增值利用受到缺乏合适的异源宿主来生产木质素降解酶的限制。在这里,我们表明,在烟草中表达真菌基因能够以可溶性形式生产与木质素降解相关的 7 大类酶中的 35 种中的 23 种(测试的 35 种中的 23 种)成员,可直接用于木质素活性测定。我们在模型木质素二聚体氧化的背景下对这些酶的一部分进行了组合表征,结果表明,与直接添加过氧化物相比,过氧化物生成剂与过氧化物酶的精细偶联导致更广泛的 C-C 键断裂。过氧化物酶同工酶活性的比较表明,C-C 键的断裂程度取决于过氧化物酶的特性,这表明过氧化物酶在木质素氧化的背景下各自具有特异性。我们预计利用烟草作为平台快速生产各种真菌木质素降解酶将有助于更好地理解它们在自然界中的协同作用,并释放它们在木质素增值利用方面的潜力,包括在植物宿主本身中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/728f/8410833/f08a28822cc9/42003_2021_2464_Fig1_HTML.jpg

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