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实验和计算洞察 NO 与 ferric microperoxidase 结合的机制。互变异构可能起到解释 pH 依赖性的作用。

Experimental and Computational Insight into the Mechanism of NO Binding to Ferric Microperoxidase. The Likely Role of Tautomerization to Account for the pH Dependence.

机构信息

Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Krakow, Poland.

Department of Chemistry, Ludwigs-Maximilians University, Butenandtstrasse 5-13, 81377 Munich, Germany.

出版信息

Inorg Chem. 2021 Nov 1;60(21):15948-15967. doi: 10.1021/acs.inorgchem.1c00933. Epub 2021 Sep 3.

DOI:10.1021/acs.inorgchem.1c00933
PMID:34476946
Abstract

According to the current paradigm, the metal-hydroxo bond in a six-coordinate porphyrin complex is believed to be significantly less reactive in ligand substitution than the analogous metal-aqua bond, due to a much higher strength of the former bond. Here, we report kinetic studies for nitric oxide (NO) binding to a heme-protein model, acetylated microperoxidase-11 (AcMP-11), that challenge this paradigm. In the studied pH range 7.4-12.6, ferric AcMP-11 exists in three acid-base forms, assigned in the literature as [(AcMP-11)Fe(HO)(HisH)] (), [(AcMP-11)Fe(OH)(HisH)] (), and [(AcMP-11)Fe(OH)(His)] (). From the pH dependence of the second-order rate constant for NO binding (), we determined individual rate constants characterizing forms -, revealing only a ca. 10-fold decrease in the NO binding rate on going from ( = 3.8 × 10 M s) to ( = 4.0 × 10 M s) and the inertness of . These findings lead to the abandonment of the dissociatively activated mechanism, in which the reaction rate can be directly correlated with the Fe-OH bond energy, as the mechanistic explanation for the process with regard to . The reactivity of is accounted for through the existence of a tautomeric equilibrium between the major [(AcMP-11)Fe(OH)(HisH)] () and minor [(AcMP-11)Fe(HO)(His)] () species, of which the second one is assigned as the NO binding target due to its labile Fe-OH bond. The proposed mechanism is further substantiated by quantum-chemical calculations, which confirmed both the significant labilization of the Fe-OH bond in the [(AcMP-11)Fe(HO)(His)] tautomer and the feasibility of the tautomer formation, especially after introducing empirical corrections to the computed relative acidities of the HO and HisH ligands based on the experimental p values. It is shown that the "effective lability" of the axial ligand (OH/HO) in may be comparable to the lability of the HO ligand in .

摘要

根据目前的模式,六配位卟啉配合物中的金属-羟键被认为在配体取代反应中比类似的金属-水键的反应性低得多,这是由于前者键的强度要高得多。在这里,我们报告了对一种血红素蛋白模型(乙酰化微过氧化物酶-11(AcMP-11))的一氧化氮(NO)结合的动力学研究,这对这一模式提出了挑战。在所研究的 pH 值范围 7.4-12.6 下,三价 AcMP-11 存在于三种酸碱形式中,在文献中分别被指定为 [(AcMP-11)Fe(HO)(HisH)] ()、[(AcMP-11)Fe(OH)(HisH)] ()和[(AcMP-11)Fe(OH)(His)] ()。从 NO 结合的二级速率常数随 pH 的变化(),我们确定了表征形式 - 的单独速率常数,表明从(= 3.8 × 10 M s)到(= 4.0 × 10 M s),NO 结合速率仅降低了约 10 倍,而保持了的惰性。这些发现导致放弃了离解激活机制,在该机制中,反应速率可以直接与 Fe-OH 键能相关联,因为该机制对于关于的过程不能提供合理的解释。的反应性可以通过主要的 [(AcMP-11)Fe(OH)(HisH)] ()和次要的 [(AcMP-11)Fe(HO)(His)] ()物种之间的互变异构平衡来解释,其中第二个物种被指定为 NO 结合靶标,因为它的 Fe-OH 键不稳定。该提议的机制通过量子化学计算得到进一步证实,该计算证实了 [(AcMP-11)Fe(HO)(His)] 互变异构体中 Fe-OH 键的明显不稳定,并且特别是在根据实验 p 值对计算的 HO 和 HisH 配体的相对酸度进行经验校正后,互变异构体的形成是可行的。结果表明,轴向配体(OH/HO)在中的“有效不稳定”性可能与 HO 配体在中的不稳定相似。

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