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狗狗们都出来了?——应激诱导通读转录本的生物发生。

Who let the DoGs out? - biogenesis of stress-induced readthrough transcripts.

机构信息

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA; Howard Hughes Medical Institute, Yale University, New Haven, CT, USA.

出版信息

Trends Biochem Sci. 2022 Mar;47(3):206-217. doi: 10.1016/j.tibs.2021.08.003. Epub 2021 Sep 3.

Abstract

Readthrough transcription caused by inefficient 3'-end cleavage of nascent mRNAs has emerged as a hallmark of the mammalian cellular stress response and results in the production of long noncoding RNAs known as downstream-of-gene (DoG)-containing transcripts. DoGs arise from around 10% of human protein-coding genes and are retained in the nucleus. They are produced minutes after cell exposure to stress and can be detected hours after stress removal. However, their biogenesis and the role(s) that DoGs or their production play in the cellular stress response are incompletely understood. We discuss findings that implicate host and viral proteins in the mechanisms underlying DoG production, as well as the transcriptional landscapes that accompany DoG induction under different stress conditions.

摘要

通读转录是由于新生 mRNA 的 3'末端切割效率低下引起的,它已成为哺乳动物细胞应激反应的一个标志,并导致产生长非编码 RNA,这些 RNA 被称为基因下游(DoG)包含转录本。DoGs 来源于约 10%的人类蛋白编码基因,并保留在细胞核中。它们在细胞暴露于应激后几分钟产生,并在应激去除后数小时检测到。然而,它们的生物发生以及 DoGs 或其产生在细胞应激反应中的作用尚不完全清楚。我们讨论了一些发现,这些发现表明宿主和病毒蛋白参与了 DoG 产生的机制,以及在不同应激条件下伴随 DoG 诱导的转录景观。

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