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利用等位基因特异性基因恢复基因型和表型。

Recovering genotypes and phenotypes using allele-specific genes.

机构信息

Program in Computational Biology and Bioinformatics, Yale University, New Haven, USA.

Molecular Biophysics and Biochemistry, Yale University, New Haven, USA.

出版信息

Genome Biol. 2021 Sep 7;22(1):263. doi: 10.1186/s13059-021-02477-x.

Abstract

With the recent increase in RNA sequencing efforts using large cohorts of individuals, surveying allele-specific gene expression is becoming increasingly frequent. Here, we report that, despite not containing explicit variant information, a list of genes known to be allele-specific in an individual is enough to recover key variants and link the individuals back to their genotypes and phenotypes. This creates a privacy conundrum.

摘要

随着使用大量个体进行 RNA 测序工作的最近增加,检测等位基因特异性基因表达变得越来越频繁。在这里,我们报告说,尽管没有包含明确的变体信息,但一份已知在个体中具有等位基因特异性的基因列表足以恢复关键变体,并将个体与其基因型和表型联系起来。这就产生了一个隐私难题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48c7/8425091/181af57a6dab/13059_2021_2477_Fig1_HTML.jpg

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