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金刚烷连接的 1,2,4-三唑衍生物作为潜在的 11β-HSD1 抑制剂的结构见解和对接分析。

Structural Insights and Docking Analysis of Adamantane-Linked 1,2,4-Triazole Derivatives as Potential 11β-HSD1 Inhibitors.

机构信息

Department of Physical and Analytical Chemistry, Faculty of Chemistry, Oviedo University-CINN, 33006 Oviedo, Spain.

Crystallography and Chemistry of Materials, CrisQuimMat, Department of Chemistry, Universidad de Los Andes, Carrera 1 No. 18A-10, Bogotá 111711, Colombia.

出版信息

Molecules. 2021 Sep 2;26(17):5335. doi: 10.3390/molecules26175335.

Abstract

The solid-state structural analysis and docking studies of three adamantane-linked 1,2,4-triazole derivatives are presented. Crystal structure analyses revealed that compound crystallizes in the triclinic -1 space group, while compounds and crystallize in the same monoclinic 2/ space group. Since the only difference between them is the substitution on the aryl group, the electronic nature of these NO and halogen groups seems to have no influence over the formation of the solid. However, a probable correlation with the size of the groups is not discarded due to the similar intermolecular disposition between the NO/Cl substituted molecules. Despite the similarities, CE-B3LYP energy model calculations show that pairwise interaction energies vary between them, and therefore the total packing energy is affected. HOMO-LUMO calculated energies show that the NO group influences the reactivity properties characterizing the molecule as soft and with the best disposition to accept electrons. Further, in silico studies predicted that the compounds might be able to inhibit the 11β-HSD1 enzyme, which is implicated in obesity and diabetes. Self- and cross-docking experiments revealed that a number of non-native 11β-HSD1 inhibitors were able to accurately dock within the 11β-HSD1 X-ray structure . The molecular docking of the adamantane-linked 1,2,4-triazoles have similar predicted binding affinity scores compared to the native ligand 4YQ. However, they were unable to form interactions with key active site residues. Based on these docking results, a series of potentially improved compounds were designed using computer aided drug design tools. The docking results of the new compounds showed similar predicted 11β-HSD1 binding affinity scores as well as interactions to a known potent 11β-HSD1 inhibitor.

摘要

本文呈现了三种金刚烷连接的 1,2,4-三唑衍生物的固态结构分析和对接研究。晶体结构分析表明,化合物 以三斜晶系 -1 空间群结晶,而化合物 和 以相同的单斜晶系 2/ 空间群结晶。由于它们之间唯一的区别是芳基上的取代基,这些 NO 和卤素基团的电子性质似乎对固体的形成没有影响。然而,由于 NO/Cl 取代分子之间存在相似的分子间排列,因此不能排除与基团大小的可能相关性。尽管存在相似性,但 CE-B3LYP 能量模型计算表明它们之间的成对相互作用能不同,因此总堆积能受到影响。HOMO-LUMO 计算能量表明,NO 基团影响了表征分子为软物质和最易接受电子的反应性性质。此外,计算机模拟研究预测这些化合物可能能够抑制 11β-HSD1 酶,该酶与肥胖和糖尿病有关。自对接和交叉对接实验表明,许多非天然的 11β-HSD1 抑制剂能够准确地对接在 11β-HSD1 X 射线结构内。与天然配体 4YQ 相比,金刚烷连接的 1,2,4-三唑的分子对接具有相似的预测结合亲和力评分。然而,它们无法与关键的活性位点残基形成相互作用。基于这些对接结果,使用计算机辅助药物设计工具设计了一系列潜在改进的化合物。新化合物的对接结果显示出与已知强效 11β-HSD1 抑制剂相似的预测 11β-HSD1 结合亲和力评分以及相互作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e37e/8433897/42d86f34bba5/molecules-26-05335-g001.jpg

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