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噬菌体蛋白对 H-NS 蛋白的新型抗抑制作用机制。

Novel anti-repression mechanism of H-NS proteins by a phage protein.

机构信息

Department of Macromolecular Biochemistry, Leiden Institute of Chemistry, Einsteinweg 55, 2333 CC Leiden, The Netherlands.

Centre for Microbial Cell Biology, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands.

出版信息

Nucleic Acids Res. 2021 Oct 11;49(18):10770-10784. doi: 10.1093/nar/gkab793.

Abstract

H-NS family proteins, bacterial xenogeneic silencers, play central roles in genome organization and in the regulation of foreign genes. It is thought that gene repression is directly dependent on the DNA binding modes of H-NS family proteins. These proteins form lateral protofilaments along DNA. Under specific environmental conditions they switch to bridging two DNA duplexes. This switching is a direct effect of environmental conditions on electrostatic interactions between the oppositely charged DNA binding and N-terminal domains of H-NS proteins. The Pseudomonas lytic phage LUZ24 encodes the protein gp4, which modulates the DNA binding and function of the H-NS family protein MvaT of Pseudomonas aeruginosa. However, the mechanism by which gp4 affects MvaT activity remains elusive. In this study, we show that gp4 specifically interferes with the formation and stability of the bridged MvaT-DNA complex. Structural investigations suggest that gp4 acts as an 'electrostatic zipper' between the oppositely charged domains of MvaT protomers, and stabilizes a structure resembling their 'half-open' conformation, resulting in relief of gene silencing and adverse effects on P. aeruginosa growth. The ability to control H-NS conformation and thereby its impact on global gene regulation and growth might open new avenues to fight Pseudomonas multidrug resistance.

摘要

H-NS 家族蛋白是细菌异源沉默子,在基因组组织和外源基因调控中发挥核心作用。人们认为基因抑制直接依赖于 H-NS 家族蛋白的 DNA 结合模式。这些蛋白质沿着 DNA 形成横向原丝。在特定的环境条件下,它们会切换到桥接两个 DNA 双链。这种切换是环境条件对 H-NS 蛋白的带相反电荷的 DNA 结合和 N 端结构域之间静电相互作用的直接影响。裂解性噬菌体 LUZ24 编码蛋白 gp4,它调节铜绿假单胞菌的 H-NS 家族蛋白 MvaT 的 DNA 结合和功能。然而,gp4 影响 MvaT 活性的机制仍不清楚。在这项研究中,我们表明 gp4 特异性干扰桥接 MvaT-DNA 复合物的形成和稳定性。结构研究表明,gp4 作为 MvaT 原聚体带相反电荷结构域之间的“静电拉链”,稳定类似于其“半开”构象的结构,导致基因沉默的缓解和对铜绿假单胞菌生长的不利影响。控制 H-NS 构象的能力,从而影响全局基因调控和生长,可能为对抗铜绿假单胞菌多药耐药性开辟新途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcaa/8501957/46f0a0236d6c/gkab793fig1.jpg

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