Tzeli Demeter, Raugei Simone, Xantheas Sotiris S
Laboratory of Physical Chemistry, Department of Chemistry, National and Kapodistrian University of Athens, Panepistimiopolis Zografou, Athens 157 84, Greece.
Theoretical and Physical Chemistry Institute, National Hellenic Research Foundation, 48 Vassileos Constantinou Avenue, Athens 116 35, Greece.
J Chem Theory Comput. 2021 Oct 12;17(10):6080-6091. doi: 10.1021/acs.jctc.1c00485. Epub 2021 Sep 21.
Iron-sulfur clusters play important roles in biology as parts of electron-transfer chains and catalytic cofactors. Here, we report a detailed computational analysis of a structural model of the simplest natural iron-sulfur cluster of rubredoxin and its cationic counterparts. Specifically, we investigated adiabatic reduction energies, dissociation energies, and bonding properties of the low-lying electronic states of the complexes [Fe(SCH)] using multireference (CASSCF, MRCISD), and coupled cluster [CCSD(T)] methodologies. We show that the nature of the Fe-S chemical bond and the magnitude of the ionization potentials in the anionic and cationic [Fe(SCH)] complexes offer a physical rationale for the relative stabilization, structure, and speciation of these complexes. Anionic and cationic complexes present different types of chemical bonds: prevalently ionic in [Fe(SCH)] complexes and covalent in [Fe(SCH)] complexes. The ionic bonds result in an energy gain for the transition [Fe(SCH)] → [Fe(SCH)] (i.e., Fe → Fe) of 1.5 eV, while the covalent bonds result in an energy loss for the transition [Fe(SCH)] → [Fe(SCH)] of 16.6 eV, almost half of the ionization potential of Fe. The ionic versus covalent bond character influences the Fe-S bond strength and length, that is, ionic Fe-S bonds are longer than covalent ones by about 0.2 Å (for Fe) and 0.04 Å (for Fe). Finally, the average Fe-S heterolytic bond strength is 6.7 eV (Fe) and 14.6 eV (Fe) at the RCCSD(T) level of theory.
铁硫簇作为电子传递链和催化辅因子的一部分,在生物学中发挥着重要作用。在此,我们报告了对铁氧化还原蛋白最简单天然铁硫簇及其阳离子对应物的结构模型进行的详细计算分析。具体而言,我们使用多参考(CASSCF、MRCISD)和耦合簇[CCSD(T)]方法研究了配合物[Fe(SCH)]低电子态的绝热还原能、离解能和键合性质。我们表明,Fe-S化学键的性质以及阴离子和阳离子[Fe(SCH)]配合物中电离势的大小为这些配合物的相对稳定性、结构和形态提供了物理依据。阴离子和阳离子配合物呈现不同类型的化学键:[Fe(SCH)]配合物中主要是离子键,[Fe(SCH)]配合物中是共价键。离子键导致[Fe(SCH)]→[Fe(SCH)](即Fe→Fe)跃迁的能量增益为1.5 eV,而共价键导致[Fe(SCH)]→[Fe(SCH)]跃迁的能量损失为16.6 eV,几乎是Fe电离势的一半。离子键与共价键的性质影响Fe-S键的强度和长度,即离子型Fe-S键比共价型Fe-S键长约0.2 Å(对于Fe)和0.04 Å(对于Fe)。最后,在RCCSD(T)理论水平下,平均Fe-S异裂键强度对于Fe为6.7 eV,对于Fe为14.6 eV。