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转录组分析和加权基因共表达网络揭示了苄基异硫氰酸酯对 . 的多靶抗菌机制

Transcriptome Analysis and Weighted Gene Co-expression Network Reveal Multitarget-Directed Antibacterial Mechanisms of Benzyl Isothiocyanate against .

机构信息

Department of Food and Bioengineering, Shaanxi University of Science and Technology, Shaanxi 710021, China.

Department of Pathobiology & Veterinary Science, University of Connecticut, 61 North Eagleville Road, Storrs, Connecticut 06269, United States.

出版信息

J Agric Food Chem. 2021 Oct 6;69(39):11733-11741. doi: 10.1021/acs.jafc.1c03979. Epub 2021 Sep 24.

Abstract

can cause many diseases and has a strong tendency to develop resistance to multiple antibiotics. In this study, benzyl isothiocyanate (BITC) was shown to have an excellent inhibitory effect on ATCC25923 and methicillin-resistant strains, with a minimum inhibitory concentration of 10 μg/mL. Under a scanning electron microscope, shrinkage and lysis of the cellular envelope were observed when exposed to BITC, and a bactericidal mode of BITC against was further confirmed through flow cytometry. Additionally, the RNA profiles of cells exposed to BITC indicated a violent transcriptional response to BITC. Through Kyoto Encyclopedia of Genes and Genomes analysis, it was found that many pathways involving bacterial survival were significantly affected, such as RNA degradation, oxidative phosphorylation, arginine biosynthesis, and so forth. A gene co-expression network was constructed using weighted gene co-expression network analysis, and six biologically meaningful co-expression modules and 125 hub genes were identified from the network. Among them, EfeB, GroES, SmpB, and Lsp were possibly targeted by BITC, leading to the death of . Our results indicated a great potential of BITC to be applied in food safety and pharmaceuticals, highlighting its multitarget-directed bactericidal effects on .

摘要

能够引发多种疾病,并且具有很强的对抗多种抗生素的耐药性倾向。在这项研究中,苄基异硫氰酸酯(BITC)被证明对 ATCC25923 和耐甲氧西林 菌株具有极好的抑制作用,其最小抑菌浓度为 10 μg/mL。在扫描电子显微镜下,当暴露于 BITC 时,观察到细胞包膜的收缩和裂解,并且通过流式细胞术进一步证实了 BITC 对 的杀菌模式。此外,暴露于 BITC 的 细胞的 RNA 图谱表明,BITC 引起了强烈的转录反应。通过京都基因与基因组百科全书分析,发现许多涉及细菌存活的途径受到显著影响,如 RNA 降解、氧化磷酸化、精氨酸生物合成等。使用加权基因共表达网络分析构建了基因共表达网络,从网络中鉴定出 6 个具有生物学意义的共表达模块和 125 个枢纽基因。其中,EfeB、GroES、SmpB 和 Lsp 可能是 BITC 的靶标,导致 死亡。我们的结果表明,BITC 在食品安全和药物方面具有很大的应用潜力,突出了其对 的多靶标杀菌作用。

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