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[Met5]脑啡肽和第三种形式的[Leu5]脑啡肽的晶体结构:对一种新型折叠β-片层的观察

The crystal structures of [Met5]enkephalin and a third form of [Leu5]enkephalin: observations of a novel pleated beta-sheet.

作者信息

Griffin J F, Langs D A, Smith G D, Blundell T L, Tickle I J, Bedarkar S

出版信息

Proc Natl Acad Sci U S A. 1986 May;83(10):3272-6. doi: 10.1073/pnas.83.10.3272.

Abstract

The structures of [Met5]enkephalin (Tyr-Gly-Gly-Phe-Met) and [Leu5]enkephalin (Tyr-Gly-Gly-Phe-Leu) have been determined from single crystal x-ray diffraction data and refined to residuals of 0.100 and 0.092, respectively. The [Met5]enkephalin structure consists of dimers forming antiparallel beta-sheets extending in the monoclinic ac plane with 10.6 water molecules per dimer. The two molecules, related by pseudo two-fold axes, have similar backbone conformations and similar tyrosine and phenylalanine side-chain conformations. Both methionine residues are disordered and the disorder is different in the two independent molecules. Additional hydrogen bonds connect adjacent dimers to form infinite sheets normal to the b axis. The water molecules are found mainly in the interstices between the sheets. [Leu5]Enkephalin crystallizes as a monohydrate that is isomorphous with the [Met5]enkephalin structure with respect to the beta-sheet but different with respect to the tyrosine and phenylalanine side-chain conformations and water content. The peptide chains in both structures are fully extended and more nearly planar than pleated. The planes of the peptide chains in the dimers form an angle of 143.3 degrees with one another in [Met5]enkephalin and 156.0 degrees in [Leu5]enkephalin. This produces a zigzag pattern or pleat in the beta-sheets perpendicular to the direction of the peptide chains and, therefore, perpendicular to the normal beta-sheet pleat. The average repeat distance between Ni and Ni+2 in the peptide chains of both structures is 7.10 A, versus an ideal value of 6.68 A.

摘要

[甲硫氨酸5]脑啡肽(酪氨酸-甘氨酸-甘氨酸-苯丙氨酸-甲硫氨酸)和[亮氨酸5]脑啡肽(酪氨酸-甘氨酸-甘氨酸-苯丙氨酸-亮氨酸)的结构已通过单晶X射线衍射数据确定,并分别精修至残余因子为0.100和0.092。[甲硫氨酸5]脑啡肽结构由二聚体组成,形成反平行β-折叠片层,在单斜晶系的ac平面中延伸,每个二聚体有10.6个水分子。通过伪二次轴相关的两个分子具有相似的主链构象以及相似的酪氨酸和苯丙氨酸侧链构象。两个甲硫氨酸残基都是无序的,且在两个独立分子中的无序情况不同。额外的氢键连接相邻二聚体,形成垂直于b轴的无限片层。水分子主要存在于片层之间的空隙中。[亮氨酸5]脑啡肽以一水合物形式结晶,就β-折叠片层而言与[甲硫氨酸5]脑啡肽结构同晶型,但在酪氨酸和苯丙氨酸侧链构象以及水含量方面有所不同。两种结构中的肽链均完全伸展,且比褶皱状更接近平面状。在[甲硫氨酸5]脑啡肽中,二聚体中肽链平面彼此形成143.3度角,在[亮氨酸5]脑啡肽中为156.0度角。这在垂直于肽链方向的β-折叠片中产生锯齿状图案或褶皱,因此垂直于正常的β-折叠片层褶皱。两种结构的肽链中镍和镍+2之间的平均重复距离为7.10埃,而理想值为6.68埃。

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