• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

[Met5]脑啡肽和第三种形式的[Leu5]脑啡肽的晶体结构:对一种新型折叠β-片层的观察

The crystal structures of [Met5]enkephalin and a third form of [Leu5]enkephalin: observations of a novel pleated beta-sheet.

作者信息

Griffin J F, Langs D A, Smith G D, Blundell T L, Tickle I J, Bedarkar S

出版信息

Proc Natl Acad Sci U S A. 1986 May;83(10):3272-6. doi: 10.1073/pnas.83.10.3272.

DOI:10.1073/pnas.83.10.3272
PMID:3458181
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC323495/
Abstract

The structures of [Met5]enkephalin (Tyr-Gly-Gly-Phe-Met) and [Leu5]enkephalin (Tyr-Gly-Gly-Phe-Leu) have been determined from single crystal x-ray diffraction data and refined to residuals of 0.100 and 0.092, respectively. The [Met5]enkephalin structure consists of dimers forming antiparallel beta-sheets extending in the monoclinic ac plane with 10.6 water molecules per dimer. The two molecules, related by pseudo two-fold axes, have similar backbone conformations and similar tyrosine and phenylalanine side-chain conformations. Both methionine residues are disordered and the disorder is different in the two independent molecules. Additional hydrogen bonds connect adjacent dimers to form infinite sheets normal to the b axis. The water molecules are found mainly in the interstices between the sheets. [Leu5]Enkephalin crystallizes as a monohydrate that is isomorphous with the [Met5]enkephalin structure with respect to the beta-sheet but different with respect to the tyrosine and phenylalanine side-chain conformations and water content. The peptide chains in both structures are fully extended and more nearly planar than pleated. The planes of the peptide chains in the dimers form an angle of 143.3 degrees with one another in [Met5]enkephalin and 156.0 degrees in [Leu5]enkephalin. This produces a zigzag pattern or pleat in the beta-sheets perpendicular to the direction of the peptide chains and, therefore, perpendicular to the normal beta-sheet pleat. The average repeat distance between Ni and Ni+2 in the peptide chains of both structures is 7.10 A, versus an ideal value of 6.68 A.

摘要

[甲硫氨酸5]脑啡肽(酪氨酸-甘氨酸-甘氨酸-苯丙氨酸-甲硫氨酸)和[亮氨酸5]脑啡肽(酪氨酸-甘氨酸-甘氨酸-苯丙氨酸-亮氨酸)的结构已通过单晶X射线衍射数据确定,并分别精修至残余因子为0.100和0.092。[甲硫氨酸5]脑啡肽结构由二聚体组成,形成反平行β-折叠片层,在单斜晶系的ac平面中延伸,每个二聚体有10.6个水分子。通过伪二次轴相关的两个分子具有相似的主链构象以及相似的酪氨酸和苯丙氨酸侧链构象。两个甲硫氨酸残基都是无序的,且在两个独立分子中的无序情况不同。额外的氢键连接相邻二聚体,形成垂直于b轴的无限片层。水分子主要存在于片层之间的空隙中。[亮氨酸5]脑啡肽以一水合物形式结晶,就β-折叠片层而言与[甲硫氨酸5]脑啡肽结构同晶型,但在酪氨酸和苯丙氨酸侧链构象以及水含量方面有所不同。两种结构中的肽链均完全伸展,且比褶皱状更接近平面状。在[甲硫氨酸5]脑啡肽中,二聚体中肽链平面彼此形成143.3度角,在[亮氨酸5]脑啡肽中为156.0度角。这在垂直于肽链方向的β-折叠片中产生锯齿状图案或褶皱,因此垂直于正常的β-折叠片层褶皱。两种结构的肽链中镍和镍+2之间的平均重复距离为7.10埃,而理想值为6.68埃。

相似文献

1
The crystal structures of [Met5]enkephalin and a third form of [Leu5]enkephalin: observations of a novel pleated beta-sheet.[Met5]脑啡肽和第三种形式的[Leu5]脑啡肽的晶体结构:对一种新型折叠β-片层的观察
Proc Natl Acad Sci U S A. 1986 May;83(10):3272-6. doi: 10.1073/pnas.83.10.3272.
2
Crystal structure of an extended-conformation leucine-enkephalin dimer monohydrate.延伸构象亮氨酸脑啡肽二聚体一水合物的晶体结构
Life Sci. 1987 May 18;40(20):1995-9. doi: 10.1016/0024-3205(87)90289-x.
3
Crystal structures of [Met5] and [(4-bromo)Phe4,Met5]enkephalins: formation of a dimeric antiparallel beta-structure.[甲硫氨酸5]和[(4-溴)苯丙氨酸4,甲硫氨酸5]脑啡肽的晶体结构:二聚体反平行β结构的形成
J Biochem. 1987 Feb;101(2):485-90. doi: 10.1093/oxfordjournals.jbchem.a121934.
4
X-ray diffraction studies of enkephalins. Crystal structure of [(4'-bromo) Phe4,Leu5]enkephalin.脑啡肽的X射线衍射研究。[(4'-溴)苯丙氨酸4,亮氨酸5]脑啡肽的晶体结构。
Biochem J. 1984 Mar 15;218(3):677-89. doi: 10.1042/bj2180677.
5
Conserved and novel structural characteristics of enantiomorphic Leu-enkephalin. X-ray crystal analysis of Leu-enkephalin enantiomer, L-Tyr-Gly-Gly-L-Phe-L-Leu and D-Tyr-Gly-Gly-D-Phe-D-Leu.对映体亮氨酸脑啡肽的保守和新颖结构特征。亮氨酸脑啡肽对映体L-酪氨酸-甘氨酸-甘氨酸-L-苯丙氨酸-L-亮氨酸和D-酪氨酸-甘氨酸-甘氨酸-D-苯丙氨酸-D-亮氨酸的X射线晶体分析。
Int J Pept Protein Res. 1994 Apr;43(4):325-31. doi: 10.1111/j.1399-3011.1994.tb00526.x.
6
NOE data at 500 MHz reveal the proximity of phenyl and tyrosine rings in enkephalin.500兆赫下的核欧沃豪斯效应(NOE)数据揭示了脑啡肽中苯环和酪氨酸环的接近程度。
FEBS Lett. 1986 Mar 31;198(2):245-50. doi: 10.1016/0014-5793(86)80414-8.
7
Conformational states of Leu5- and Met5-enkephalins in solution.亮氨酸脑啡肽和甲硫氨酸脑啡肽在溶液中的构象状态。
Biochem Biophys Res Commun. 1985 Feb 15;126(3):1029-35. doi: 10.1016/0006-291x(85)90288-8.
8
Effects of thioamide substitution for the enkephalin conformation. Crystal structure of Boc-Tyr-Gly-Gly-Phe psi [CSNH]Leu-OBzl.硫代酰胺取代对脑啡肽构象的影响。Boc-Tyr-Gly-Gly-Phe ψ[CSNH]Leu-OBzl的晶体结构。
Int J Pept Protein Res. 1989 Nov;34(5):369-73.
9
Molecular-dynamics simulations of [Met5]- and [D-Ala2,Met5]-enkephalins. Biological implication of monomeric folded and dimeric unfolded conformations.[Met5]-脑啡肽和[D-Ala2,Met5]-脑啡肽的分子动力学模拟。单体折叠构象和二聚体未折叠构象的生物学意义。
Biochem J. 1988 Oct 15;255(2):621-8.
10
Crystal structure of methionine-enkephalin.甲硫氨酸脑啡肽的晶体结构。
Biochem Biophys Res Commun. 1986 Jan 29;134(2):698-703. doi: 10.1016/s0006-291x(86)80476-4.

引用本文的文献

1
Exploring Conformational Preferences of Leu-enkephalin Using the Conformational Search and Double-Hybrid DFT Energy Calculations.利用构象搜索和双杂化密度泛函理论能量计算探索亮氨酸脑啡肽的构象偏好
ACS Omega. 2022 Jul 26;7(31):27755-27768. doi: 10.1021/acsomega.2c03942. eCollection 2022 Aug 9.
2
Co-Evolution of Opioid and Adrenergic Ligands and Receptors: Shared, Complementary Modules Explain Evolution of Functional Interactions and Suggest Novel Engineering Possibilities.阿片类和肾上腺素能配体与受体的共同进化:共享、互补模块解释功能相互作用的进化并提示新的工程可能性。
Life (Basel). 2021 Nov 10;11(11):1217. doi: 10.3390/life11111217.
3
MOLS sampling and its applications in structural biophysics.分子抽样及其在结构生物物理学中的应用。
Biophys Rev. 2010 Dec;2(4):169-179. doi: 10.1007/s12551-010-0039-y. Epub 2010 Nov 16.
4
Preparation and evaluation at the delta opioid receptor of a series of linear leu-enkephalin analogues obtained by systematic replacement of the amides.通过系统取代酰胺,获得一系列线性亮氨酸脑啡肽类似物,并对其在 delta 阿片受体上的作用进行了制备和评价。
ACS Chem Neurosci. 2013 Aug 21;4(8):1204-16. doi: 10.1021/cn4000583. Epub 2013 May 20.
5
Exploring the Backbone of Enkephalins To Adjust Their Pharmacological Profile for the δ-Opioid Receptor.探索脑啡肽的骨干结构,以调整其对 δ-阿片受体的药理学特性。
ACS Chem Neurosci. 2010 Nov 17;1(11):757-69. doi: 10.1021/cn1000759. Epub 2010 Sep 17.
6
NCAD, a database integrating the intrinsic conformational preferences of non-coded amino acids.NCAD,一个整合了非编码氨基酸固有构象偏好的数据库。
J Phys Chem B. 2010 Jun 3;114(21):7413-22. doi: 10.1021/jp102092m.
7
An estimate of the numbers and density of low-energy structures (or decoys) in the conformational landscape of proteins.蛋白质构象景观中低能量结构(或诱饵)的数量和密度估计。
PLoS One. 2009;4(4):e5148. doi: 10.1371/journal.pone.0005148. Epub 2009 Apr 9.
8
Exploring conformational space using a mean field technique with MOLS sampling.使用具有分子抽样的平均场技术探索构象空间。
J Biosci. 2007 Aug;32(5):909-20. doi: 10.1007/s12038-007-0091-3.
9
Conformational stability and three-dimensional model of the delta-opioid pharmacophore for the extended antiparallel dimer structure of Met-enkephalin in water.甲硫氨酸脑啡肽在水中延伸反平行二聚体结构的δ-阿片受体药效基团的构象稳定性和三维模型。
J Mol Model. 2007 Jan;13(1):171-7. doi: 10.1007/s00894-006-0139-6. Epub 2006 Sep 14.
10
The role of crystallography in drug design.晶体学在药物设计中的作用。
AAPS J. 2005 Dec 7;7(4):E813-9. doi: 10.1208/aapsj070478.

本文引用的文献

1
Configurations of Polypeptide Chains With Favored Orientations Around Single Bonds: Two New Pleated Sheets.围绕单键具有有利取向的多肽链构型:两种新的折叠片层。
Proc Natl Acad Sci U S A. 1951 Nov;37(11):729-40. doi: 10.1073/pnas.37.11.729.
2
Beta-pleated sheets in oligopeptide crystals.寡肽晶体中的β-折叠片层
Int J Pept Protein Res. 1981 Mar;17(3):322-9. doi: 10.1111/j.1399-3011.1981.tb01998.x.
3
Conformational and geometrical properties of beta-sheets in proteins. II. Antiparallel and mixed beta-sheets.蛋白质中β折叠的构象和几何性质。II. 反平行和混合β折叠
J Mol Biol. 1981 Feb 15;146(1):119-41. doi: 10.1016/0022-2836(81)90369-7.
4
Structure of beta-sheets. Origin of the right-handed twist and of the increased stability of antiparallel over parallel sheets.β-折叠的结构。右手螺旋的起源以及反平行β-折叠相对于平行β-折叠稳定性增加的原因。
J Mol Biol. 1982 Nov 25;162(1):89-112. doi: 10.1016/0022-2836(82)90163-2.
5
X-ray diffraction studies of enkephalins. Crystal structure of [(4'-bromo) Phe4,Leu5]enkephalin.脑啡肽的X射线衍射研究。[(4'-溴)苯丙氨酸4,亮氨酸5]脑啡肽的晶体结构。
Biochem J. 1984 Mar 15;218(3):677-89. doi: 10.1042/bj2180677.
6
Crystal structure of leucine-enkephalin.亮氨酸脑啡肽的晶体结构。
Nature. 1983;306(5942):447-50. doi: 10.1038/306447a0.
7
Correlation between circular dichroism data and biological activities of 2,5 substituted enkephalin analogues.2,5-取代脑啡肽类似物的圆二色性数据与生物活性之间的相关性
Life Sci. 1980 Jul 14;27(2):129-33. doi: 10.1016/0024-3205(80)90454-3.
8
Conformational states of Leu5- and Met5-enkephalins in solution.亮氨酸脑啡肽和甲硫氨酸脑啡肽在溶液中的构象状态。
Biochem Biophys Res Commun. 1985 Feb 15;126(3):1029-35. doi: 10.1016/0006-291x(85)90288-8.
9
Identification of two related pentapeptides from the brain with potent opiate agonist activity.从大脑中鉴定出两种具有强效阿片激动剂活性的相关五肽。
Nature. 1975 Dec 18;258(5536):577-80. doi: 10.1038/258577a0.
10
Preliminary analysis of 1H and 13C spectral and relaxation behavior in methionine-enkephalin.甲硫氨酸脑啡肽中氢-1和碳-13光谱及弛豫行为的初步分析。
Proc Natl Acad Sci U S A. 1976 Aug;73(8):2589-93. doi: 10.1073/pnas.73.8.2589.