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镧系元素添加剂辅助的蛋白质结晶过程中二价阳离子的影响。

Influence of Divalent Cations in the Protein Crystallization Process Assisted by Lanthanide-Based Additives.

机构信息

Laboratoire de Chimie, ENS de Lyon, CNRS, UMR 5182, Université Lyon, Lyon F-69342, France.

Polyvalan, Lyon F-69342, France.

出版信息

Inorg Chem. 2021 Oct 18;60(20):15208-15214. doi: 10.1021/acs.inorgchem.1c01635. Epub 2021 Oct 1.

Abstract

The use of lanthanide complexes as powerful auxiliaries for biocrystallography prompted us to systematically analyze the influence of the commercial crystallization kit composition on the efficiency of two lanthanide additives: [Eu(DPA)] and Tb-Xo4. This study reveals that the tris(dipicolinate) complex presents a lower chemical stability and a strong tendency toward false positives, which are detrimental for its use in a high-throughput robotized crystallization platform. In particular, the crystal structures of (Mg(HO))[Eu(DPA)]·7HO (), {(Ca(HO))[Eu(DPA)]}·10HO (), and {Cu(DPA)(HO)} (), resulting from spontaneous crystallization in the presence of a divalent alkaline-earth cation and transmetalation, are reported. On the other hand, Tb-Xo4 is perfectly soluble in the crystallization media, stable in the presence of alkaline-earth dications, and slowly decomposes (within days) by transmetalation with transition metals. The original structure of [TbL(HO)]Cl·15HO () is also described, where L represents a bis(pinacolato)triazacyclononane ligand. This paper also highlights a potential synergy of interactions between Tb-Xo4 and components of the crystallization mixtures, leading to the formation of complex adducts like {AdkA/Tb-Xo4/Mg/glycerol} in the protein binding sites. The observation of such multicomponent adducts illustrated the complexity and versatility of the supramolecular chemistry occurring at the surface of the proteins.

摘要

镧系配合物作为生物结晶学的强大辅助剂的应用促使我们系统地分析商业结晶试剂盒成分对两种镧系添加剂

[Eu(DPA)]和 Tb-Xo4 的效率的影响。本研究表明,三(二吡啶甲酰胺)络合物具有较低的化学稳定性和较强的假阳性倾向,这不利于其在高通量机器人结晶平台上的使用。特别是,报告了在二价碱土金属阳离子存在下自发结晶和转金属化的(Mg(HO))[Eu(DPA)]·7HO (), {(Ca(HO))[Eu(DPA)]}·10HO (), 和 {Cu(DPA)(HO)} ()的晶体结构。另一方面,Tb-Xo4 完全可溶于结晶介质中,在存在碱土二价阳离子时稳定,并且通过与过渡金属的转金属化缓慢分解(数天内)。还描述了 [TbL(HO)]Cl·15HO ()的原始结构,其中 L 代表双(频哪醇)三唑并环壬烷配体。本文还强调了 Tb-Xo4 和结晶混合物成分之间相互作用的潜在协同作用,导致在蛋白质结合部位形成复杂的加合物,如{AdkA/Tb-Xo4/Mg/glycerol}。观察到这种多组分加合物说明了在蛋白质表面发生的超分子化学的复杂性和多功能性。

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