Center for Functional Genomics of Microbes, Abteilung Molekulare Genetik und Infektionsbiologie, Felix-Hausdorff-Str. 8, 17487, Greifswald, Germany.
Department of Genetics, Faculty of Agriculture, Ain Shams University, Shoubra El-Khaymah, Cairo, 11241, Egypt.
Curr Genet. 2022 Feb;68(1):115-124. doi: 10.1007/s00294-021-01215-x. Epub 2021 Oct 7.
Under non-inducing conditions (absence of galactose), yeast structural genes of the GAL regulon are repressed by Gal80, preventing interaction of Gal4 bound to UAS promoter motifs with general factors of the transcriptional machinery. In this work, we show that Gal80 is also able to interact with histone deacetylase-recruiting corepressor proteins Cyc8 and Tup1, indicating an additional mechanism of gene repression. This is supported by our demonstration that a lexA-Gal80 fusion efficiently mediates repression of a reporter gene with an upstream lexA operator sequence. Corepressor interaction and in vivo gene repression could be mapped to a Gal80 minimal domain of 65 amino acids (aa 81-145). Site-directed mutagenesis of selected residues within this domain showed that a cluster of aromatic-hydrophobic amino acids (YLFV, aa 118-121) is important, although not solely responsible, for gene repression. Using chromatin immunoprecipitation, Cyc8 and Tup1 were shown to be present at the GAL1 promoter in a wild-type strain but not in a gal80 mutant strain under non-inducing (derepressing) growth conditions. Expression of a GAL1-lacZ fusion was elevated in a tup1 mutant (but not in a cyc8 mutant) grown in derepressing medium, indicating that Tup1 may be mainly responsible for this second mechanism of Gal80-dependent gene repression.
在非诱导条件下(缺乏半乳糖),酵母 GAL 调控基因簇的结构基因受到 Gal80 的抑制,从而阻止与 UAS 启动子基序结合的 Gal4 与转录机制的一般因子相互作用。在这项工作中,我们表明 Gal80 还能够与招募组蛋白去乙酰化酶的核心抑制蛋白 Cyc8 和 Tup1 相互作用,表明存在基因抑制的另一种机制。这一点得到了我们的实验证明,即 LexA-Gal80 融合蛋白有效地介导了带有上游 LexA 操纵子序列的报告基因的抑制。核心抑制蛋白的相互作用和体内基因抑制可以映射到 Gal80 的 65 个氨基酸(aa81-145)最小结构域。该结构域内选定残基的定点突变表明,一组芳香族疏水性氨基酸(YLFV,aa118-121)很重要,尽管不是唯一负责基因抑制的因素。通过染色质免疫沉淀,在野生型菌株中,Cyc8 和 Tup1 在非诱导(去抑制)生长条件下的 GAL1 启动子上被检测到,但在 gal80 突变菌株中未被检测到。在去抑制培养基中生长的 tup1 突变体(而不是 cyc8 突变体)中,GAL1-lacZ 融合表达升高,表明 Tup1 可能主要负责这种第二种 Gal80 依赖性基因抑制机制。