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酿酒酵母激活蛋白对辅阻遏物Sin3和Cyc8的启动子募集作用

Promoter recruitment of corepressors Sin3 and Cyc8 by activator proteins of the yeast Saccharomyces cerevisiae.

作者信息

Kliewe Felix, Engelhardt Maike, Aref Rasha, Schüller Hans-Joachim

机构信息

Institut für Genetik und Funktionelle Genomforschung, Jahnstrasse 15a, 17487, Greifswald, Germany.

出版信息

Curr Genet. 2017 Aug;63(4):739-750. doi: 10.1007/s00294-017-0677-8. Epub 2017 Feb 7.

DOI:10.1007/s00294-017-0677-8
PMID:28175933
Abstract

It is generally assumed that pathway-specific transcriptional activators recruit pleiotropic coactivators (such as chromatin-modifying complexes or general transcription factors), while specific repressors contact pleiotropic corepressors creating an inaccessible chromatin by the action of histone deacetylases. We have previously shown that the negative regulator Opi1 of yeast phospholipid biosynthesis inhibits transcription by recruiting corepressors Sin3 and Cyc8 in the presence of precursor molecules inositol and choline. To get access to its target genes, Opi1 physically contacts and counteracts DNA-bound activator Ino2. By using chromatin immunoprecipitation, we show that Sin3 and Cyc8 can be detected at Opi1 target promoters INO1 and CHO2 under repressing and derepressing conditions and that corepressor binding is effective even in the absence of Opi1, while Ino2 is absolutely required. Thus, corepressors may be recruited not only by repressors but also by activators such as Ino2. Indeed, we could demonstrate direct interaction of Ino2 with Sin3 and Cyc8. The Opi1 repressor interaction domain within Ino2 is also able to contact Sin3 and Cyc8. Recruitment of corepressors by an activator is not a regulatory exception as we could show that activators Pho4 and Hac1 also contain domains being able to interact with Sin3 and Cyc8.

摘要

一般认为,特定途径的转录激活因子招募多效性共激活因子(如染色质修饰复合物或通用转录因子),而特定的阻遏因子则与多效性共阻遏因子相互作用,通过组蛋白去乙酰化酶的作用形成无法接近的染色质。我们之前已经表明,酵母磷脂生物合成的负调控因子Opi1在存在前体分子肌醇和胆碱的情况下,通过招募共阻遏因子Sin3和Cyc8来抑制转录。为了接近其靶基因,Opi1与结合在DNA上的激活因子Ino2发生物理接触并与之拮抗。通过染色质免疫沉淀,我们发现在抑制和去抑制条件下,在Opi1靶启动子INO1和CHO2处可以检测到Sin3和Cyc8,并且即使在没有Opi1的情况下,共阻遏因子的结合也是有效的,而Ino2是绝对必需的。因此,共阻遏因子不仅可以被阻遏因子招募,也可以被诸如Ino2这样的激活因子招募。事实上,我们能够证明Ino2与Sin3和Cyc8之间存在直接相互作用。Ino2内的Opi1阻遏因子相互作用结构域也能够与Sin3和Cyc8接触。激活因子招募共阻遏因子并非是一种调控上的例外情况,因为我们可以证明激活因子Pho4和Hac1也含有能够与Sin3和Cyc8相互作用的结构域。

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Sin3: insight into its transcription regulatory functions.Sin3:深入了解其转录调控功能。
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Multiple histone deacetylases are recruited by corepressor Sin3 and contribute to gene repression mediated by Opi1 regulator of phospholipid biosynthesis in the yeast Saccharomyces cerevisiae.多个组蛋白去乙酰化酶被核心抑制因子 Sin3 招募,并有助于由磷脂生物合成调节剂 Opi1 在酵母酿酒酵母中介导的基因抑制。
Mol Genet Genomics. 2012 Jun;287(6):461-72. doi: 10.1007/s00438-012-0692-x. Epub 2012 Apr 28.
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The Cyc8-Tup1 complex inhibits transcription primarily by masking the activation domain of the recruiting protein.
Functional characterization and comparative analysis of gene repression-mediating domains interacting with yeast pleiotropic corepressors Sin3, Cyc8 and Tup1.
功能表征与酵母多效核心抑制因子 Sin3、Cyc8 和 Tup1 相互作用的基因抑制介导结构域的比较分析。
Curr Genet. 2023 Jun;69(2-3):127-139. doi: 10.1007/s00294-023-01262-6. Epub 2023 Mar 1.
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Regulation of chromatin accessibility by hypoxia and HIF.缺氧和 HIF 对染色质可及性的调控。
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Genetic analysis argues for a coactivator function for the Saccharomyces cerevisiae Tup1 corepressor.遗传分析表明,酿酒酵母 Tup1 核心抑制因子具有共激活子功能。
Genetics. 2021 Oct 2;219(2). doi: 10.1093/genetics/iyab120.
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Transcriptional repressor Gal80 recruits corepressor complex Cyc8-Tup1 to structural genes of the Saccharomyces cerevisiae GAL regulon.转录抑制因子 Gal80 将核心抑制复合物 Cyc8-Tup1 招募到酿酒酵母 GAL 调控基因的结构基因上。
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Cyc8-Tup1 复合物主要通过掩盖募集蛋白的激活结构域来抑制转录。
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Pleiotropic corepressors Sin3 and Ssn6 interact with repressor Opi1 and negatively regulate transcription of genes required for phospholipid biosynthesis in the yeast Saccharomyces cerevisiae.多功能核心抑制因子 Sin3 和 Ssn6 与抑制因子 Opi1 相互作用,负调控酵母酿酒酵母磷脂生物合成所需基因的转录。
Mol Genet Genomics. 2011 Feb;285(2):91-100. doi: 10.1007/s00438-010-0589-5. Epub 2010 Nov 23.
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Sin3: master scaffold and transcriptional corepressor.Sin3:主要支架和转录共抑制因子。
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Dimerization of yeast transcription factors Ino2 and Ino4 is regulated by precursors of phospholipid biosynthesis mediated by Opi1 repressor.酵母转录因子Ino2和Ino4的二聚化受由Opi1阻遏物介导的磷脂生物合成前体的调控。
Curr Genet. 2008 Jul;54(1):35-45. doi: 10.1007/s00294-008-0197-7. Epub 2008 Jun 10.
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Regulation of the HAP1 gene involves positive actions of histone deacetylases.HAP1基因的调控涉及组蛋白去乙酰化酶的正向作用。
Biochem Biophys Res Commun. 2007 Oct 12;362(1):120-125. doi: 10.1016/j.bbrc.2007.07.156. Epub 2007 Aug 8.
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Transcriptional repression by Tup1-Ssn6.由Tup1-Ssn6介导的转录抑制
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