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日内瓦湖中 Bdellovibrio 及类似生物体对模拟极端气候事件的短期动态响应。

Short-Term Dynamics of Bdellovibrio and Like Organisms in Lake Geneva in Response to a Simulated Climatic Extreme Event.

机构信息

Université Savoie Mont-Blanc, INRAE, UMR CARRTEL, Thonon-les-Bains, France.

Laboratoire de Physiologie Cellulaire et Végétale, CNRS, CEA, INRAE, IRIG, Université Grenoble Alpes, Grenoble, France.

出版信息

Microb Ecol. 2022 Oct;84(3):717-729. doi: 10.1007/s00248-021-01875-9. Epub 2021 Oct 8.

Abstract

The short time-scale dynamics of three families of Bdellovibrio and like organisms (i.e. Bdellovibrionaceae, Peredibacteraceae, and Bacteriovoracaceae) were studied on the surface waters of Lake Geneva in summer. Using mesocosms deployed nearshore in July 2019, we simulated an extreme climatic event (an input of carbon from the watershed in response to runoff from the catchment, light reduction, and mixing in response to stormy conditions) and aimed to study the impact of both abiotic and biotic factors on their dynamics. The three families of Bdellovibrio and like organisms (BALOs) showed different dynamics during the experiment. Peredibacteraceae was the most abundant group, whereas Bacteriovoracaceae was the least abundant. Compared with the other two families, the abundance of Bdellovibrionaceae did not fluctuate, remaining relatively stable over time. Environmental variables only partially explained the dynamics of these families; in particular, temperature, pH, and chloride concentrations were positively correlated with Bacteriovoracaceae, Bdellovibrionaceae, and Peredibacteraceae abundance, respectively. Prokaryote-like particles (PLPs), such as those with high DNA content (HDNA), were strongly and positively correlated with Peredibacteraceae and Bacteriovoracaceae. In contrast, no relationships were found between Bdellovibrionaceae and PLP abundance, nor between the virus-like particles (VLPs) and the different BALOs. Overall, the experiment revealed that predation was stable in the face of the simulated climatic events. In addition, we observed that Peredibacteraceae and Bacteriovoracaceae share common traits, while Bdellovibrionaceae seems to constitute a distinct category.

摘要

在夏季对日内瓦湖表面水中的三个噬菌体科(即噬菌蛭弧菌科、普雷代菌科和噬菌体科)及其类似生物(Bdellovibrio and like organisms,BALOs)家族进行了短时间尺度动态研究。使用 2019 年 7 月近岸部署的中尺度模型,我们模拟了一个极端气候事件(流域碳输入以响应集水区径流水,光照减少以及对暴风雨条件的混合),并旨在研究非生物和生物因素对其动态的影响。在实验过程中,三个 BALOs 家族表现出不同的动态。普雷代菌科是最丰富的群体,而噬菌体科则是最不丰富的群体。与其他两个家族相比,噬菌蛭弧菌科的丰度没有波动,随着时间的推移保持相对稳定。环境变量仅部分解释了这些家族的动态;特别是,温度、pH 值和氯化物浓度分别与噬菌体科、噬菌蛭弧菌科和普雷代菌科的丰度呈正相关。类似于原核生物的颗粒(prokaryote-like particles,PLPs),如具有高 DNA 含量(high DNA,HDNA)的颗粒,与普雷代菌科和噬菌体科呈强烈正相关。相比之下,噬菌蛭弧菌科与 PLP 丰度之间没有关系,VLPs 与不同的 BALOs 之间也没有关系。总体而言,实验表明,捕食在面对模拟气候事件时保持稳定。此外,我们观察到普雷代菌科和噬菌体科具有共同的特征,而噬菌蛭弧菌科似乎构成了一个独特的类别。

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