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高等植物谷氨酰胺合成酶的结构特性、分子调控和功能多样性:一种数据挖掘生物信息学方法。

Structural property, molecular regulation, and functional diversity of glutamine synthetase in higher plants: a data-mining bioinformatics approach.

机构信息

Mulberry Tissue Culture Lab, Central Sericultural Germplasm Resources Centre (CSGRC), Central Silk Board, Ministry of Textile, Govt. of India, Hosur, 635109, India.

Host Plant Section, Central Muga Eri Research & Training Institute, Central Silk Board, Ministry of Textile, Govt. of India, Lahdoigarh, Jorhat, Assam, 785700, India.

出版信息

Plant J. 2021 Dec;108(6):1565-1584. doi: 10.1111/tpj.15536. Epub 2021 Oct 31.

Abstract

Glutamine synthetase (GS; E.C.6.3.1.2) is a key enzyme in higher plants with two isozymes, cytosolic GS1 and plastidic GS2, and involves in the assimilation and recycling of NH ions and maintenance of complex traits such as crop nitrogen-use efficiency and yield. Our present understanding of crop nitrogen-use efficiency and its correlation with the functional role of the GS family genes is inadequate, which delays harnessing the benefit of this key enzyme in crop improvement. In this report, we performed a comprehensive investigation on the phylogenetic relationship, structural properties, complex multilevel gene regulation, and expression patterns of the GS genes to enrich present understanding about the enzyme. Our Gene Ontology and protein-protein interactions analysis revealed the functional aspects of GS isozymes in stress mitigation, aging, nucleotide biosynthesis/transport, DNA repair and response to metals. The insight gained here contributes to the future research strategies in developing climate-smart crops for global sustainability.

摘要

谷氨酰胺合成酶(GS;EC 6.3.1.2)是高等植物中的一种关键酶,有两种同工酶,即细胞质 GS1 和质体 GS2,参与 NH 离子的同化和再循环以及维持作物氮利用效率和产量等复杂特性。我们目前对作物氮利用效率及其与 GS 家族基因功能作用的相关性的理解还不够充分,这阻碍了利用这种关键酶在作物改良中的益处。在本报告中,我们对 GS 基因的系统发育关系、结构特性、复杂的多层次基因调控和表达模式进行了全面研究,以丰富对该酶的现有认识。我们的基因本体论和蛋白质-蛋白质相互作用分析揭示了 GS 同工酶在减轻压力、衰老、核苷酸生物合成/转运、DNA 修复和对金属的反应中的功能方面。这里获得的见解有助于制定未来的研究策略,以开发适应气候变化的作物,实现全球可持续性。

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