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通过基质辅助激光解吸电离飞行时间质谱法对暴露于铬之后进行的蛋白质组学分析。 (原句表述似乎不完整,正常应是“A proteomic analysis of [具体对象] after exposure to Cr by MALDI-TOF mass spectrometry.” )

A proteomic analysis of after exposure to Cr by MALDI-TOF mass spectrometry.

作者信息

Özenoğlu-Aydınoğlu Sinem, Yıldızhan Hatice, Cansaran-Duman Demet

机构信息

Biotechnology Institute, Ankara University, Keçiören, 06135 Ankara, Turkey.

出版信息

3 Biotech. 2021 Oct;11(10):444. doi: 10.1007/s13205-021-02986-3. Epub 2021 Sep 22.

DOI:10.1007/s13205-021-02986-3
PMID:34631345
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8458510/
Abstract

The problem of heavy metal pollution in nature has increased rapidly in recent years. Hexavalent chromium (Cr) is one of the most toxic heavy metals that cause environmental pollution. Although many studies in the literature that illuminate the stress response mechanisms of biological organisms such as bacteria, algae, and plants against heavy metals, there is limited information about revealing the protein level changes of lichen species in response to heavy metal stress. Here, we used a MALDI-TOF-based proteomic assay to determine protein level changes in after exposure to Cr heavy metal stress at 6, 18 and 24 h. It was determined that expression levels of 26, 149 and 66 proteins changed in 6, 18 and 24 h after Cr application compared to the control sample, respectively. We identified 9 common proteins expressed at three different time levels (6, 18, 24 h) and evaluated their protein-protein interaction profiles with the STRING tool. According to the results of the study, it was determined that the expression level of six proteins was up-regulated (OP4, KIP3, BNI5, VSP64, HSP 60, BCK1) and three proteins were down-regulated (MNS1, ABZ2, ATG4) from the expression level of nine proteins in total with Cr exposure. It was determined that nine proteins were also found to be effective in biological processes such as stress signaling, transcription regulation and cellular detoxification metabolisms. To confirm the protein expression level, we analyzed the HSP60 protein by western blot assay. It has been shown that exposure to Cr exposure in caused an increase in HSP60 protein level compared to the control sample (non-exposed Cr). In this study, new knowledge are presented for the use of as a biosorption agent in the removal of industrial wastes in biotechnological applications.

摘要

近年来,自然界中的重金属污染问题迅速加剧。六价铬(Cr)是造成环境污染的毒性最强的重金属之一。尽管文献中有许多研究阐述了细菌、藻类和植物等生物有机体对重金属的应激反应机制,但关于揭示地衣物种在重金属胁迫下蛋白质水平变化的信息却很有限。在此,我们采用基于基质辅助激光解吸电离飞行时间质谱(MALDI-TOF)的蛋白质组学分析方法,来确定[地衣物种名称未给出]在暴露于铬重金属胁迫6小时、18小时和24小时后的蛋白质水平变化。结果发现,与对照样品相比,在施加铬后6小时、18小时和24小时,[地衣物种名称未给出]中分别有26种、149种和66种蛋白质的表达水平发生了变化。我们鉴定出了在三个不同时间水平(6小时、18小时、24小时)表达的9种常见蛋白质,并使用STRING工具评估了它们的蛋白质-蛋白质相互作用图谱。根据研究结果,在总共9种蛋白质中,发现有6种蛋白质(OP4、KIP3、BNI5、VSP64、HSP 60、BCK1)的表达水平在铬暴露后上调,3种蛋白质(MNS1、ABZ2、ATG4)的表达水平下调。还发现这9种蛋白质在应激信号传导、转录调控和细胞解毒代谢等生物学过程中也发挥作用。为了确认蛋白质表达水平,我们通过蛋白质免疫印迹分析对HSP60蛋白进行了检测。结果表明,与对照样品(未暴露于铬)相比,[地衣物种名称未给出]暴露于铬导致HSP60蛋白水平升高。在本研究中,为[地衣物种名称未给出]在生物技术应用中作为生物吸附剂用于去除工业废物提供了新的知识。