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火鸡和猪源 中抗菌药物耐药基因的自然水平基因转移

Natural Horizontal Gene Transfer of Antimicrobial Resistance Genes in spp. From Turkeys and Swine.

作者信息

Guernier-Cambert Vanina, Trachsel Julian, Maki Joel, Qi Jing, Sylte Matthew J, Hanafy Zahra, Kathariou Sophia, Looft Torey

机构信息

Food Safety and Enteric Pathogens Research Unit, United States Department of Agriculture, Agricultural Research Services, National Animal Disease Center, Ames, Ames, IA, United States.

Agricultural Research Service Research Participation Program, Oak Ridge Institute for Science and Education, Oak Ridge, TN, United States.

出版信息

Front Microbiol. 2021 Sep 27;12:732969. doi: 10.3389/fmicb.2021.732969. eCollection 2021.

Abstract

Antibiotic-resistant constitutes a serious threat to public health. The clonal expansion of resistant strains and/or the horizontal spread of resistance genes to other strains and species can hinder the clinical effectiveness of antibiotics to treat severe campylobacteriosis. Still, gaps exist in our understanding of the risks of acquisition and spread of antibiotic resistance in . While the transfer of antimicrobial resistance genes between species natural transformation has been extensively demonstrated, experimental studies have favored the use of naked DNA to obtain transformants. In this study, we used experimental designs closer to real-world conditions to evaluate the possible transfer of antimicrobial resistance genes between strains of the same or different species ( or ) and originating from different animal hosts (swine or turkeys). This was evaluated through co-culture experiments and with dual-strain inoculation of turkeys, followed by whole genome sequencing of parental and newly emerged strains. , we observed four independent horizontal gene transfer events leading to the acquisition of resistance to beta-lactams (), aminoglycosides [ and ] and tetracycline []. Observed events involved the displacement of resistance-associated genes by a mutated version, or the acquisition of genomic islands harboring a resistance determinant by homologous recombination; we did not detect the transfer of resistance-carrying plasmids even though they were present in some strains. , we recovered a newly emerged strain with dual-resistance pattern and identified the replacement of an existing non-functional by a functional in the recipient strain. Whole genome comparisons allowed characterization of the events involved in the horizontal spread of resistance genes between following co-culture and dual inoculation. Our study also highlights the potential for antimicrobial resistance transfer across species originating from turkeys and swine, which may have implications for farms hosting both species in close proximity.

摘要

抗生素耐药性对公共卫生构成严重威胁。耐药菌株的克隆扩增和/或耐药基因向其他菌株和物种的水平传播会阻碍抗生素治疗严重弯曲杆菌病的临床效果。然而,我们对弯曲杆菌中抗生素耐药性获得和传播风险的理解仍存在差距。虽然弯曲杆菌物种间抗菌耐药基因通过自然转化进行转移已得到广泛证实,但实验研究倾向于使用裸DNA来获得转化体。在本研究中,我们采用更接近现实条件的实验设计,以评估同一物种或不同物种(空肠弯曲杆菌或结肠弯曲杆菌)且源自不同动物宿主(猪或火鸡)的菌株之间抗菌耐药基因的可能转移。这通过共培养实验以及对火鸡进行双菌株接种来评估,随后对亲本菌株和新出现的菌株进行全基因组测序。结果,我们观察到四个独立的水平基因转移事件,导致获得对β-内酰胺类(头孢噻肟)、氨基糖苷类(庆大霉素和链霉素)和四环素(土霉素)的耐药性。观察到的事件涉及耐药相关基因被突变版本取代,或通过同源重组获得携带耐药决定簇的基因组岛;尽管某些菌株中存在携带耐药性的质粒,但我们未检测到其转移。此外,我们获得了一株具有双重耐药模式的新出现菌株,并鉴定出受体菌株中一个现有的无功能基因被一个功能性基因所取代。全基因组比较使得能够表征空肠弯曲杆菌共培养和双接种后耐药基因水平传播所涉及的事件。我们的研究还强调了源自火鸡和猪的弯曲杆菌物种间抗菌耐药性转移的可能性,这可能对近距离饲养这两个物种的养殖场产生影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c444/8504540/7d6f8c0dee8b/fmicb-12-732969-g001.jpg

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