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超越肽键形成:缩合结构域在天然产物生物合成中的多功能作用。

Beyond peptide bond formation: the versatile role of condensation domains in natural product biosynthesis.

机构信息

Laboratory for Biomolecular Discovery & Engineering, Department of Biology, KU Leuven, Leuven, Belgium.

VIB-KU Leuven Center for Microbiology, Flanders Institute for Biotechnology, Leuven, Belgium.

出版信息

Nat Prod Rep. 2021 Oct 20;38(10):1910-1937. doi: 10.1039/d0np00098a.

Abstract

Covering: up to the end of 2020Nonribosomal peptide synthetases are remarkable molecular machines that produce a wide range of structurally complex peptide natural products with important applications in medicine and agriculture. Condensation domains play a central role in these biosynthetic pathways by catalysing amide bond formation between various aminoacyl substrates. In recent years, however, it has become increasingly clear that the catalytic repertoire of C domains extends far beyond conventional peptide bond formation. C domains have been shown to perform highly diverse functions during nonribosomal peptide assembly, such as β-lactam formation, dehydration, hydrolysis, chain length control, cycloaddition, Pictet-Spengler cyclization, Dieckmann condensation and recruitment of auxiliary enzymes. In this review, a comprehensive overview of the multifaceted role of C domains in the biosynthesis of specialized metabolites in bacteria and fungi is presented. Different perspectives are also offered on how the exceptional functional versatility of C domains may be exploited for bioengineering approaches to expand the chemical diversity of nonribosomal peptides and other natural products.

摘要

涵盖

截至 2020 年底非核糖体肽合酶是一类卓越的分子机器,能够产生具有重要医学和农业应用价值的广泛结构复杂的肽类天然产物。缩合结构域在这些生物合成途径中起着核心作用,通过催化各种氨酰基底物之间的酰胺键形成。然而,近年来,C 结构域的催化范围远远超出了传统的肽键形成这一点变得越来越明显。已经证明 C 结构域在非核糖体肽组装过程中具有高度多样化的功能,如β-内酰胺形成、脱水、水解、链长控制、环加成、Pictet-Spengler 环化、Dieckmann 缩合和辅助酶的募集。在这篇综述中,全面介绍了 C 结构域在细菌和真菌中特殊代谢物生物合成中的多方面作用。还从不同角度探讨了 C 结构域的特殊功能多样性如何被用于生物工程方法,以扩大非核糖体肽和其他天然产物的化学多样性。

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