Zhang Zeyu, Ma Yarui, Guo Xiaolei, Du Yingxi, Zhu Qing, Wang Xiaobing, Duan Changzhu
Department of the First Clinical Medicine, Chongqing Medical University, Chongqing, China.
Department of Medical Oncology, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing, China.
Front Pharmacol. 2021 Oct 8;12:749134. doi: 10.3389/fphar.2021.749134. eCollection 2021.
Lung cancer has emerged as one of the most common cancers in recent years. The mitochondrial electron transport chain (ETC) is closely connected with metabolic pathways and inflammatory response. However, the influence of ETC-associated genes on the tumor immune response and the pathogenesis of lung cancer is not clear and needs further exploration. The RNA-sequencing transcriptome and clinical characteristic data of LUAD were downloaded from the Cancer Genome Atlas (TCGA) database. The LASSO algorithm was used to build the risk signature, and the prediction model was evaluated by the survival analysis and receiver operating characteristic curve. We explored the function of FDX1 through flow cytometry, molecular biological methods, and liquid chromatography-tandem mass spectrometry/mass spectrometry (LC-MS/MS). 12 genes (, , , , , , , , , , , and ) were selected to build the risk signature, and the risk score was calculated with the coefficients from the LASSO algorithm. The 1-year, 3-year, and 5-year area under the curve (AUC) of ROC curves of the dataset were 0.7, 0.674, and 0.692, respectively. Univariate Cox analysis and multivariate Cox regression analysis indicated that the risk signature is an independent risk factor for LUAD patients. Among these genes, we focused on the gene, and we found that knockdown of FDX1 neither inhibited tumor cell growth nor did it induce apoptosis or abnormal cell cycle distribution. But FDX1 could promote the ATP production. Furthermore, our study showed that FDX1 was closely related to the glucose metabolism, fatty acid oxidation, and amino acid metabolism. Collectively, this study provides new clues about carcinogenesis induced by ETC-associated genes in LUAD and paves the way for finding potential targets of LUAD.
肺癌已成为近年来最常见的癌症之一。线粒体电子传递链(ETC)与代谢途径和炎症反应密切相关。然而,ETC相关基因对肿瘤免疫反应和肺癌发病机制的影响尚不清楚,需要进一步探索。从癌症基因组图谱(TCGA)数据库下载了肺腺癌(LUAD)的RNA测序转录组和临床特征数据。使用LASSO算法构建风险特征,并通过生存分析和受试者工作特征曲线评估预测模型。我们通过流式细胞术、分子生物学方法和液相色谱-串联质谱/质谱(LC-MS/MS)探索了FDX1的功能。选择12个基因(、、、、、、、、、、和)构建风险特征,并根据LASSO算法的系数计算风险评分。该数据集的ROC曲线的1年、3年和5年曲线下面积(AUC)分别为0.7、0.674和0.692。单因素Cox分析和多因素Cox回归分析表明,风险特征是LUAD患者的独立危险因素。在这些基因中,我们重点关注基因,发现敲低FDX1既不抑制肿瘤细胞生长,也不诱导细胞凋亡或异常细胞周期分布。但FDX1可以促进ATP生成。此外,我们的研究表明,FDX1与葡萄糖代谢、脂肪酸氧化和氨基酸代谢密切相关。总的来说,本研究为LUAD中ETC相关基因诱导的致癌作用提供了新线索,并为寻找LUAD的潜在靶点铺平了道路。