Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Kyonggi-Do 16227, Republic of Korea.
Department of Microbiology, School of Medicine, Kyungpook National University, Daegu 41944, Republic of Korea.
Int J Syst Evol Microbiol. 2021 Oct;71(10). doi: 10.1099/ijsem.0.005060.
Two white colony-forming, Gram-stain-negative, non-sporulating and motile bacteria, designated G-4-1-8 and RP-4-7, were isolated from forest soil and Arctic soil, respectively. Both strains showed antimicrobial activity against Gram-negative pathogens ( and ) and could grow at a pH range of pH 4.0-11.0 (optimum, pH 7.0-9.0). Phylogenetic analyses based on their 16S rRNA gene sequences indicated that strains G-4-1-8 and RP-4-7 formed a lineage within the family and were clustered as members of the genus . Strain G-4-1-8 showed the highest 16S rRNA sequence similarity to JC2948 (98.1 %), while strain RP-4-7 showed the highest similarity to DNBP6-1 (98.8 %). The only respiratory quinone in both strains was ubiquinone Q-8. Their principal cellular fatty acids were C, cyclo-C, summed feature 3 (iso-C 2-OH and/or C 7) and summed feature 8 (C 7 and/or C 6). Their major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol and an unidentified aminophospholipid. The DNA G+C content of strains G-4-1-8 and RP-4-7 were 63.7 and 61.3 mol%, respectively, while their genome lengths were 7.44 and 9.67 Mb, respectively. The genomes of both strains showed at least 12 putative biosynthetic gene clusters. The average nucleotide identity and DNA-DNA hybridization relatedness values between both strains and most closely related species were below the species threshold values. Based on a polyphasic study, these isolated strains represent novel species belonging to the genus , for which the names sp. nov. (G-4-1-8= KACC 21617=NBRC 114603) and sp. nov. (RP-4-7=KACC 21621=NBRC 114605) are proposed.
两株白色菌落形成、革兰氏染色阴性、不产芽孢和运动的细菌,分别命名为 G-4-1-8 和 RP-4-7,分别从森林土壤和北极土壤中分离得到。这两种菌株均对革兰氏阴性病原体(和)具有抗菌活性,能够在 pH 值范围为 4.0-11.0(最佳,pH 值 7.0-9.0)的条件下生长。基于 16S rRNA 基因序列的系统发育分析表明,菌株 G-4-1-8 和 RP-4-7 在家族中形成一个谱系,并且被聚类为属的成员。菌株 G-4-1-8 与 JC2948 的 16S rRNA 序列相似度最高(98.1%),而菌株 RP-4-7 与 DNBP6-1 的相似度最高(98.8%)。两株菌的唯一呼吸醌都是泛醌 Q-8。它们的主要细胞脂肪酸为 C、环-C、总和特征 3(异-C 2-OH 和/或 C 7)和总和特征 8(C 7 和/或 C 6)。它们的主要极性脂为磷脂酰乙醇胺、双磷脂酰甘油、磷脂酰甘油和一种未鉴定的氨基磷脂。菌株 G-4-1-8 和 RP-4-7 的 DNA G+C 含量分别为 63.7%和 61.3%mol%,基因组长度分别为 7.44 和 9.67 Mb。两株菌的基因组均显示至少 12 个潜在的生物合成基因簇。两株菌与最密切相关的种之间的平均核苷酸同一性和 DNA-DNA 杂交相关度值均低于种的阈值。基于多相研究,这些分离株代表了属于属的新型种,分别命名为 sp. nov.(G-4-1-8=KACC 21617=NBRC 114603)和 sp. nov.(RP-4-7=KACC 21621=NBRC 114605)。