Chemical Synthesis and Pollution Control Key Laboratory of Sichuan Province, College of Chemistry and Chemical Engineering, China West Normal University, Nanchong 637009, P. R. China.
State Key Laboratory of Chemo/Bio-Sensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha 410082, P. R. China.
Anal Chem. 2021 Nov 9;93(44):14675-14684. doi: 10.1021/acs.analchem.1c02878. Epub 2021 Oct 25.
At the molecular level, a large number of studies exist on the use of dynamic DNA molecular circuits for disease diagnosis and biomedicine. However, how to design programmable molecular circuit devices to autonomously and accurately diagnose multiple low-abundance biomolecules in complex cellular environments remains a challenge. Here, we constructed DNAzyme logic circuits for the analysis and imaging of multiple microRNAs in living cells using Cu/ZIF-8 NPs as a nanocarrier of the logic gate modules and the Cu cofactor of the Cu-dependent DNAzyme. The logic gate modules of the logic operation system were adsorbed on the surface of Cu/ZIF-8 NPs via electrostatic interaction. After internalization, pH-responsive Cu/ZIF-8 NPs could efficiently release the logic gate modules and Cu, which allowed us to realize multiple logic computations initiated by endogenous miRNA, including one YES logic gate and two binary logic gates (OR and AND) in different living cells. Cu-DNAzyme logic circuits could quickly respond to multiple endogenous miRNAs in the complex cell environment, which also provided a new research method for the application of DNA biocomputing circuits in living cells.
在分子水平上,已有大量研究利用动态 DNA 分子电路进行疾病诊断和生物医学研究。然而,如何设计可编程分子电路器件,使其能够在复杂的细胞环境中自主、准确地诊断多种低丰度生物分子,仍然是一个挑战。在这里,我们构建了使用 Cu/ZIF-8 NPs 作为逻辑门模块的纳米载体和 Cu 依赖型 DNA 酶的 Cu 辅因子的 DNA 酶逻辑电路,用于分析和成像活细胞中的多种 microRNAs。逻辑运算系统的逻辑门模块通过静电相互作用吸附在 Cu/ZIF-8 NPs 的表面。内化后,pH 响应性的 Cu/ZIF-8 NPs 能够有效地释放逻辑门模块和 Cu,这使我们能够实现由内源性 miRNA 引发的多种逻辑计算,包括在不同的活细胞中进行的一个 YES 逻辑门和两个二进制逻辑门(OR 和 AND)。Cu-DNA 酶逻辑电路可以快速响应复杂细胞环境中的多种内源性 miRNA,这也为 DNA 生物计算电路在活细胞中的应用提供了一种新的研究方法。