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基于脱氧核酶介导的分支迁移的具有多个输出和自动复位功能的可扩展逻辑电路。

Scalable Logic Circuits with Multiple Outputs and an Automatic Reset Function Based on DNAzyme-Mediated Branch Migration.

作者信息

Shi Gu, Yan Chong, Chen Junhua

机构信息

National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-Environmental Pollution Control and Management, Institute of Eco-Environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China.

出版信息

Anal Chem. 2021 Feb 16;93(6):3273-3279. doi: 10.1021/acs.analchem.0c05173. Epub 2021 Feb 2.

Abstract

A scalable logic platform made up of multilayer DNA circuits was constructed using Pb, Cu, and Zn as the three inputs and three different fluorescent signals as the outputs. DNAzyme-guided cyclic cleavage reactions and DNA toehold-mediated strand branch migration were utilized to organize and connect nucleic acid probes for building the high-level logic architecture. The sequence communications between each circuit enable the logic network to work as a keypad lock, which is an information protection model at the molecular level. The multi-output mode was used to monitor the gradual unlocking process of the security system, from which one can determine which password is correct or not immediately. The autocatalytic cleavage of DNAzyme makes the biocomputing circuit feasible to realize the reset function automatically without external stimuli. Importantly, the logic platform is robust and can work effectively even in complex environmental samples.

摘要

构建了一个由多层DNA电路组成的可扩展逻辑平台,该平台以铅、铜和锌作为三个输入,以三种不同的荧光信号作为输出。利用DNA酶引导的循环切割反应和DNA toehold介导的链分支迁移来组织和连接核酸探针,以构建高级逻辑架构。每个电路之间的序列通信使逻辑网络能够像键盘锁一样工作,这是一种分子水平的信息保护模型。多输出模式用于监测安全系统的逐步解锁过程,从中可以立即确定哪个密码是正确的。DNA酶的自催化切割使得生物计算电路能够在没有外部刺激的情况下自动实现复位功能。重要的是,该逻辑平台具有鲁棒性,即使在复杂的环境样品中也能有效工作。

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