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神经元活动的空间可表示性。

Spatial representability of neuronal activity.

机构信息

Einstein institute of Mathematics, The Hebrew University, Jerusalem, 9190401, Israel.

School of Computing, University of Leeds, Woodhouse Lane, Leeds, LS9 2JT, UK.

出版信息

Sci Rep. 2021 Oct 25;11(1):20957. doi: 10.1038/s41598-021-00281-y.

DOI:10.1038/s41598-021-00281-y
PMID:34697340
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8546096/
Abstract

A common approach to interpreting spiking activity is based on identifying the firing fields-regions in physical or configuration spaces that elicit responses of neurons. Common examples include hippocampal place cells that fire at preferred locations in the navigated environment, head direction cells that fire at preferred orientations of the animal's head, view cells that respond to preferred spots in the visual field, etc. In all these cases, firing fields were discovered empirically, by trial and error. We argue that the existence and a number of properties of the firing fields can be established theoretically, through topological analyses of the neuronal spiking activity. In particular, we use Leray criterion powered by persistent homology theory, Eckhoff conditions and Region Connection Calculus to verify consistency of neuronal responses with a single coherent representation of space.

摘要

一种常见的尖峰活动解释方法是基于识别发放区域——在物理或配置空间中,神经元会对这些区域做出反应。常见的例子包括在导航环境中对首选位置放电的海马体位置细胞、对动物头部首选方向放电的头方向细胞、对视野中首选点作出反应的视图细胞等。在所有这些情况下,发放区域都是通过反复试验经验性地发现的。我们认为,通过对神经元尖峰活动的拓扑分析,可以从理论上确定发放区域的存在和一些性质。具体来说,我们使用持久同调理论驱动的 Leray 准则、Eckhoff 条件和区域连接演算来验证神经元反应与单一连贯的空间表示的一致性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/8793deb84c33/41598_2021_281_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/89ccd1e35218/41598_2021_281_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/1dcaf9f1de94/41598_2021_281_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/18b43cdaf2b4/41598_2021_281_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/21eb7bfe83f0/41598_2021_281_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/3ebef7d4d3b1/41598_2021_281_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/1b13d92d9d40/41598_2021_281_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/1a7a9cef6908/41598_2021_281_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/493c503313bf/41598_2021_281_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/8793deb84c33/41598_2021_281_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/89ccd1e35218/41598_2021_281_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/1dcaf9f1de94/41598_2021_281_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/18b43cdaf2b4/41598_2021_281_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/21eb7bfe83f0/41598_2021_281_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/3ebef7d4d3b1/41598_2021_281_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/1b13d92d9d40/41598_2021_281_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/1a7a9cef6908/41598_2021_281_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/493c503313bf/41598_2021_281_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d42b/8546096/8793deb84c33/41598_2021_281_Fig9_HTML.jpg

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本文引用的文献

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Evaluating State Space Discovery by Persistent Cohomology in the Spatial Representation System.在空间表示系统中通过持久上同调评估状态空间发现
Front Comput Neurosci. 2021 Apr 8;15:616748. doi: 10.3389/fncom.2021.616748. eCollection 2021.
2
From Topological Analyses to Functional Modeling: The Case of Hippocampus.从拓扑分析到功能建模:以海马体为例。
Front Comput Neurosci. 2021 Jan 11;14:593166. doi: 10.3389/fncom.2020.593166. eCollection 2020.
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The place-cell representation of volumetric space in rats.大鼠的容积空间的位置细胞表示。
Nat Commun. 2020 Feb 7;11(1):789. doi: 10.1038/s41467-020-14611-7.
4
Replays of spatial memories suppress topological fluctuations in cognitive map.空间记忆的重现抑制认知地图中的拓扑波动。
Netw Neurosci. 2019 Jul 1;3(3):707-724. doi: 10.1162/netn_a_00076. eCollection 2019.
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Origin and role of path integration in the cognitive representations of the hippocampus: computational insights into open questions.海马体认知表象中路径整合的起源和作用:对悬而未决问题的计算洞察。
J Exp Biol. 2019 Feb 6;222(Pt Suppl 1):jeb188912. doi: 10.1242/jeb.188912.
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Through synapses to spatial memory maps via a topological model.通过突触到空间记忆图的拓扑模型。
Sci Rep. 2019 Jan 24;9(1):572. doi: 10.1038/s41598-018-36807-0.
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Robust spatial memory maps encoded by networks with transient connections.具有瞬态连接的网络所编码的稳健空间记忆图。
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Spatial representation in the hippocampal formation: a history.海马结构中的空间表示:历史。
Nat Neurosci. 2017 Oct 26;20(11):1448-1464. doi: 10.1038/nn.4653.
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Viewpoints: how the hippocampus contributes to memory, navigation and cognition.观点:海马体如何影响记忆、导航和认知。
Nat Neurosci. 2017 Oct 26;20(11):1434-1447. doi: 10.1038/nn.4661.
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Transient cell assembly networks encode stable spatial memories.瞬时细胞组装网络编码稳定的空间记忆。
Sci Rep. 2017 Jun 21;7(1):3959. doi: 10.1038/s41598-017-03423-3.