The Jackson Laboratory, Bar Harbor, ME, USA.
Mamm Genome. 2022 Mar;33(1):4-18. doi: 10.1007/s00335-021-09921-0. Epub 2021 Oct 26.
The Mouse Genome Informatics (MGI) database system combines multiple expertly curated community data resources into a shared knowledge management ecosystem united by common metadata annotation standards. MGI's mission is to facilitate the use of the mouse as an experimental model for understanding the genetic and genomic basis of human health and disease. MGI is the authoritative source for mouse gene, allele, and strain nomenclature and is the primary source of mouse phenotype annotations, functional annotations, developmental gene expression information, and annotations of mouse models with human diseases. MGI maintains mouse anatomy and phenotype ontologies and contributes to the development of the Gene Ontology and Disease Ontology and uses these ontologies as standard terminologies for annotation. The Mouse Genome Database (MGD) and the Gene Expression Database (GXD) are MGI's two major knowledgebases. Here, we highlight some of the recent changes and enhancements to MGD and GXD that have been implemented in response to changing needs of the biomedical research community and to improve the efficiency of expert curation. MGI can be accessed freely at http://www.informatics.jax.org .
小鼠基因组信息学(MGI)数据库系统将多个精心整理的社区数据资源整合到一个共享的知识管理生态系统中,这些资源由共同的元数据注释标准统一。MGI 的使命是促进将小鼠作为实验模型用于理解人类健康和疾病的遗传和基因组基础。MGI 是小鼠基因、等位基因和品系命名的权威来源,也是小鼠表型注释、功能注释、发育基因表达信息以及人类疾病小鼠模型注释的主要来源。MGI 维护小鼠解剖学和表型本体,并为基因本体和疾病本体的发展做出贡献,并将这些本体用作注释的标准术语。小鼠基因组数据库(MGD)和基因表达数据库(GXD)是 MGI 的两个主要知识库。在这里,我们重点介绍了 MGD 和 GXD 中最近进行的一些更改和增强,这些更改和增强是为了响应生物医学研究界不断变化的需求以及提高专家注释效率而实施的。可以在 http://www.informatics.jax.org 免费访问 MGI。