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非球型结构精修中原子散射因子导数的消失 - 在 Hirshfeld 原子精修情况下被仔细审查的一个关键近似。

Vanishing of the atomic form factor derivatives in non-spherical structural refinement - a key approximation scrutinized in the case of Hirshfeld atom refinement.

机构信息

Department of Mathematical Sciences, Durham University, Upper Mountjoy Campus, Stockton Road, Durham, DH1 3LE, United Kingdom.

Bruker, 4 Allée Lorentz, Champs-sur-Marne, 77447 Marne-la-Vallée cedex 2, France.

出版信息

Acta Crystallogr A Found Adv. 2021 Nov 1;77(Pt 6):519-533. doi: 10.1107/S2053273321009086. Epub 2021 Oct 29.

Abstract

When calculating derivatives of structure factors, there is one particular term (the derivatives of the atomic form factors) that will always be zero in the case of tabulated spherical atomic form factors. What happens if the form factors are non-spherical? The assumption that this particular term is very close to zero is generally made in non-spherical refinements (for example, implementations of Hirshfeld atom refinement or transferable aspherical atom models), unless the form factors are refinable parameters (for example multipole modelling). To evaluate this general approximation for one specific method, a numerical differentiation was implemented within the NoSpherA2 framework to calculate the derivatives of the structure factors in a Hirshfeld atom refinement directly as accurately as possible, thus bypassing the approximation altogether. Comparing wR factors and atomic parameters, along with their uncertainties from the approximate and numerically differentiating refinements, it turns out that the impact of this approximation on the final crystallographic model is indeed negligible.

摘要

在计算结构因子的导数时,对于表列的球形原子散射因子,有一个特定的项(原子散射因子的导数)总是为零。如果散射因子是非球形的会怎样?在非球形精修中(例如,Hirshfeld 原子精修或可转移非球形原子模型的实现),通常会假设该特定项非常接近零,除非散射因子是可精修参数(例如多极建模)。为了评估这种一般近似对于一种特定方法的适用性,在 NoSpherA2 框架内实现了数值微分,以便尽可能准确地直接计算 Hirshfeld 原子精修中的结构因子导数,从而完全绕过该近似。通过比较 wR 因子和原子参数,以及来自近似和数值微分精修的不确定性,结果表明该近似对最终晶体学模型的影响确实可以忽略不计。

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