Center for Molecular Biology of Heidelberg University (ZMBH), Heidelberg, Germany.
Université de Strasbourg, CNRS, GMGM UMR 7156, Strasbourg, France.
Genome Biol. 2021 Nov 3;22(1):303. doi: 10.1186/s13059-021-02521-w.
Intermixing of genomes through meiotic reassortment and recombination of homologous chromosomes is a unifying theme of sexual reproduction in eukaryotic organisms and is considered crucial for their adaptive evolution. Previous studies of the budding yeast species Saccharomycodes ludwigii suggested that meiotic crossing over might be absent from its sexual life cycle, which is predominated by fertilization within the meiotic tetrad.
We demonstrate that recombination is extremely suppressed during meiosis in Sd. ludwigii. DNA double-strand break formation by the conserved transesterase Spo11, processing and repair involving interhomolog interactions are required for normal meiosis but do not lead to crossing over. Although the species has retained an intact meiotic gene repertoire, genetic and population analyses suggest the exceptionally rare occurrence of meiotic crossovers in its genome. A strong AT bias of spontaneous mutations and the absence of recombination are likely responsible for its unusually low genomic GC level.
Sd. ludwigii has followed a unique evolutionary trajectory that possibly derives fitness benefits from the combination of frequent mating between products of the same meiotic event with the extreme suppression of meiotic recombination. This life style ensures preservation of heterozygosity throughout its genome and may enable the species to adapt to its environment and survive with only minimal levels of rare meiotic recombination. We propose Sd. ludwigii as an excellent natural forum for the study of genome evolution and recombination rates.
通过减数分裂重组和同源染色体重组,使基因组混合是真核生物有性生殖的一个统一主题,被认为对其适应性进化至关重要。先前对芽殖酵母物种 Saccharomycodes ludwigii 的研究表明,其有性生殖周期中可能不存在减数分裂交叉,而是以减数四分体中的受精为主。
我们证明了 Sd. ludwigii 中的减数分裂过程中重组受到极大抑制。保守的转酯酶 Spo11 形成 DNA 双链断裂,涉及同源相互作用的加工和修复对于正常减数分裂是必需的,但不会导致交叉。尽管该物种保留了完整的减数分裂基因库,但遗传和群体分析表明,其基因组中减数交叉的发生极为罕见。自发突变的强烈 AT 偏倚和重组的缺失可能导致其异常低的基因组 GC 水平。
Sd. ludwigii 遵循了一条独特的进化轨迹,可能从同一减数事件产物之间频繁交配与减数重组的极度抑制相结合中获得了适应性优势。这种生活方式确保了其整个基因组的杂合性得以保留,并且可能使该物种能够适应环境并仅在极少的罕见减数重组水平下生存。我们提出 Sd. ludwigii 是研究基因组进化和重组率的极好天然论坛。