Subtype analysis and prevalence of mixed subtype infection of Blastocystis in farmed pigs from Chiba Prefecture, Japan.

Blastocystis is an intestinal eukaryote found globally in humans and a wide range of animals. Blastocystis has been reported in domestic pigs, with subtype (ST) 5 being the most dominant, followed by ST1 and ST3. PCR-sequencing is commonly used for ST identification in pigs, but it often results in an underestimation of the prevalence of mixed infections. Here, we aimed to investigate the ST distribution and prevalence of mixed ST infections of Blastocystis in pigs from Chiba Prefecture in eastern Japan. A total of 82 fecal samples positive for Blastocystis were collected from two different farms, A and B. PCR was performed using ST-specific primers for ST1, ST2, ST3, and ST5. The prevalence of single ST5 infections was 37.8% (31/82), whereas that of mixed infections with ST5 and other STs was 57.3% (47/82) . A high percentage of single ST5 infections was observed in sows, piglets, and weaners from farm A (13/15, 86.7%), whereas mixed infections of ST5 and other STs (ST1 and ST3) were observed in 3- to 5-month-old grower pigs (15/18, 83.3%). Similarly, in farm B, most sows and piglets under 1 month of age showed a single ST5 infections (12/17, 70.6%), whereas weaner, grower, and finisher pigs showed mixed infections with ST5 and other STs, including ST1, ST2, and ST3 (27/28, 96.4%). In domestic pigs, diet and rearing environments change dramatically over the course of the animal's lifetime, which may have caused this difference in the prevalence of mixed ST infections among different age groups.