• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过分子对接方法设计新型双三唑基结构以鉴定其对新型冠状病毒主要蛋白酶的抑制活性

Design of new bis-triazolyl structure for identification of inhibitory activity on COVID-19 main protease by molecular docking approach.

作者信息

Singh Gurjaspreet, Saini Anamika, Kaur Amarjit

机构信息

Department of Chemistry, Panjab University, Chandigarh 160014, India.

出版信息

J Mol Struct. 2022 Feb 15;1250:131858. doi: 10.1016/j.molstruc.2021.131858. Epub 2021 Nov 3.

DOI:10.1016/j.molstruc.2021.131858
PMID:34744185
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8563301/
Abstract

In the rapidly growing COVID-19 pandemic, designing of new drugs and evaluating their inhibitory action against main targets of corona virus could be an effective strategy to accelerate the drug discovery process and their efficacy towards corona virus disease. Herein, we design new bis-triazolyl probe for an investigation of inhibitory activity towards COVID-19 main protease by Molecular docking approach. The formulated compound has been thoroughly characterized by elemental analysis, NMR (H and C) and complete structure elucidation was achieved via X-ray crystallography. Docking study reveals that newly synthesized compound confers good inhibitory response to COVID-19 main protease as supported by calculated docking score and binding energy. Strong hydrogen bonding and hydrophobic interactions of the newly synthesized compound with several important amino acids of the main protease also helps to explain the potency of the compound to inhibit the main protease. We hope that the present study would help the researcher in the field of Medicinal chemistry and to develop potential drug against the novel corona virus.

摘要

在迅速蔓延的新冠疫情中,设计新型药物并评估其对冠状病毒主要靶点的抑制作用,可能是加速药物研发进程及其对新冠病毒疾病疗效的有效策略。在此,我们设计了新型双三唑基探针,通过分子对接方法研究其对新冠病毒主要蛋白酶的抑制活性。所制备的化合物已通过元素分析、核磁共振(氢谱和碳谱)进行了全面表征,并通过X射线晶体学实现了完整的结构解析。对接研究表明,新合成的化合物对新冠病毒主要蛋白酶具有良好的抑制反应,计算得到的对接分数和结合能也支持这一点。新合成的化合物与主要蛋白酶的几个重要氨基酸之间强烈的氢键和疏水相互作用,也有助于解释该化合物抑制主要蛋白酶的效力。我们希望本研究能帮助药物化学领域的研究人员,并开发出针对新型冠状病毒的潜在药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/2484143944f4/gr7_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/8af12b18ec60/sc1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/82831faffdb6/gr1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/17700aade37a/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/86636a46d22f/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/e19b9130de30/gr4_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/499e62a07a93/gr5_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/18457d048da3/gr6_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/2484143944f4/gr7_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/8af12b18ec60/sc1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/82831faffdb6/gr1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/17700aade37a/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/86636a46d22f/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/e19b9130de30/gr4_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/499e62a07a93/gr5_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/18457d048da3/gr6_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb1/8563301/2484143944f4/gr7_lrg.jpg

相似文献

1
Design of new bis-triazolyl structure for identification of inhibitory activity on COVID-19 main protease by molecular docking approach.通过分子对接方法设计新型双三唑基结构以鉴定其对新型冠状病毒主要蛋白酶的抑制活性
J Mol Struct. 2022 Feb 15;1250:131858. doi: 10.1016/j.molstruc.2021.131858. Epub 2021 Nov 3.
2
Inhibitory activity of hydroxychloroquine on COVID-19 main protease: An insight from MD-simulation studies.羟氯喹对新型冠状病毒主要蛋白酶的抑制活性:来自分子动力学模拟研究的见解
J Mol Struct. 2020 Nov 5;1219:128595. doi: 10.1016/j.molstruc.2020.128595. Epub 2020 Jun 2.
3
validation of coumarin derivatives as potential inhibitors against Main Protease, NSP10/NSP16-Methyltransferase, Phosphatase and Endoribonuclease of SARS CoV-2.验证香豆素衍生物作为潜在抑制剂对 SARS-CoV-2 的主要蛋白酶、NSP10/NSP16-甲基转移酶、磷酸酶和内切核糖核酸酶的抑制作用。
J Biomol Struct Dyn. 2021 Nov;39(18):7306-7321. doi: 10.1080/07391102.2020.1808075. Epub 2020 Aug 24.
4
In silico prediction of potential inhibitors for the main protease of SARS-CoV-2 using molecular docking and dynamics simulation based drug-repurposing.基于药物再利用的分子对接和动力学模拟预测 SARS-CoV-2 主要蛋白酶的潜在抑制剂的计算机预测。
J Infect Public Health. 2020 Sep;13(9):1210-1223. doi: 10.1016/j.jiph.2020.06.016. Epub 2020 Jun 16.
5
Discovery of Potent SARS-CoV-2 Inhibitors from Approved Antiviral Drugs via Docking and Virtual Screening.从已批准的抗病毒药物中通过对接和虚拟筛选发现有效的 SARS-CoV-2 抑制剂。
Comb Chem High Throughput Screen. 2021;24(3):441-454. doi: 10.2174/1386207323999200730205447.
6
Identification of bioactive molecule from (Ashwagandha) as SARS-CoV-2 main protease inhibitor.从 (印度人参)中鉴定出生物活性分子作为 SARS-CoV-2 主蛋白酶抑制剂。
J Biomol Struct Dyn. 2021 Sep;39(15):5668-5681. doi: 10.1080/07391102.2020.1790425. Epub 2020 Jul 8.
7
Virtual screening, ADME/T, and binding free energy analysis of anti-viral, anti-protease, and anti-infectious compounds against NSP10/NSP16 methyltransferase and main protease of SARS CoV-2.针对严重急性呼吸综合征冠状病毒2(SARS-CoV-2)的NSP10/NSP16甲基转移酶和主要蛋白酶的抗病毒、抗蛋白酶和抗感染化合物的虚拟筛选、药物代谢动力学/药物毒性(ADME/T)及结合自由能分析
J Recept Signal Transduct Res. 2020 Dec;40(6):605-612. doi: 10.1080/10799893.2020.1772298. Epub 2020 Jun 1.
8
Field-Template, QSAR, Ensemble Molecular Docking, and 3D-RISM Solvation Studies Expose Potential of FDA-Approved Marine Drugs as SARS-CoVID-2 Main Protease Inhibitors.场模板、QSAR、分子对接集成和 3D-RISM 溶剂化研究揭示了 FDA 批准的海洋药物作为 SARS-CoV-2 主要蛋白酶抑制剂的潜力。
Molecules. 2021 Feb 10;26(4):936. doi: 10.3390/molecules26040936.
9
In silico identification of potential inhibitors of key SARS-CoV-2 3CL hydrolase (Mpro) via molecular docking, MMGBSA predictive binding energy calculations, and molecular dynamics simulation.通过分子对接、MMGBSA 预测结合能计算和分子动力学模拟,从计算机上鉴定潜在的关键 SARS-CoV-2 3CL 水解酶(Mpro)抑制剂。
PLoS One. 2020 Jul 24;15(7):e0235030. doi: 10.1371/journal.pone.0235030. eCollection 2020.
10
Synthesis and Preclinical Evaluation of Indole Triazole Conjugates as Microtubule Targeting Agents that are Effective against MCF-7 Breast Cancer Cell Lines.吲哚三唑缀合物的合成及初步临床评价,作为有效的微管靶向剂,针对 MCF-7 乳腺癌细胞系。
Anticancer Agents Med Chem. 2021;21(8):1047-1055. doi: 10.2174/1871520620666200925102940.

引用本文的文献

1
Investigation of Curcumin-β-Cyclodextrin Complex Release in Injectable Hyaluronic Acid/Quince Seed Gum Hydrogel.姜黄素-β-环糊精复合物在可注射透明质酸/榅桲籽胶水凝胶中的释放研究。
AAPS PharmSciTech. 2025 Apr 1;26(4):99. doi: 10.1208/s12249-025-03095-7.
2
A Comprehensive Update of Anti-COVID-19 Activity of Heterocyclic Compounds.杂环化合物抗新冠病毒活性的综合更新。
Drug Des Devel Ther. 2024 May 8;18:1547-1571. doi: 10.2147/DDDT.S450499. eCollection 2024.
3
Synthesis, crystal structure and studies of novel 2,4-dimethoxy-tetrahydropyrimido[4,5-]quinolin-6(7)-ones.

本文引用的文献

1
Structural Basis of Potential Inhibitors Targeting SARS-CoV-2 Main Protease.靶向严重急性呼吸综合征冠状病毒2主蛋白酶的潜在抑制剂的结构基础
Front Chem. 2021 Mar 12;9:622898. doi: 10.3389/fchem.2021.622898. eCollection 2021.
2
Recent Progress in the Drug Development Targeting SARS-CoV-2 Main Protease as Treatment for COVID-19.以新型冠状病毒主要蛋白酶为靶点治疗新冠肺炎的药物研发新进展
Front Mol Biosci. 2020 Dec 4;7:616341. doi: 10.3389/fmolb.2020.616341. eCollection 2020.
3
The epidemiology and pathogenesis of coronavirus disease (COVID-19) outbreak.
新型2,4 - 二甲氧基 - 四氢嘧啶并[4,5 - ]喹啉 - 6(7) - 酮的合成、晶体结构及研究
RSC Adv. 2022 Jun 29;12(29):18806-18820. doi: 10.1039/d2ra02694e. eCollection 2022 Jun 22.
4
Synthesis and characterization of two new mixed-ligand Cu(II) complexes of a tridentate NN'O type Schiff base ligand and N-donor heterocyclic co-ligands: In vitro anticancer assay, DNA/human leukemia/COVID-19 molecular docking studies, and pharmacophore modeling.一种三齿NN'O型席夫碱配体与氮供体杂环共配体的两种新型混合配体铜(II)配合物的合成与表征:体外抗癌试验、DNA/人类白血病/COVID-19分子对接研究及药效团建模
Appl Organomet Chem. 2022 May;36(5):e6639. doi: 10.1002/aoc.6639. Epub 2022 Feb 24.
冠状病毒病(COVID-19)疫情的流行病学和发病机制。
J Autoimmun. 2020 May;109:102433. doi: 10.1016/j.jaut.2020.102433. Epub 2020 Feb 26.
4
World Health Organization declares global emergency: A review of the 2019 novel coronavirus (COVID-19).世界卫生组织宣布全球紧急状态:对 2019 年新型冠状病毒(COVID-19)的回顾。
Int J Surg. 2020 Apr;76:71-76. doi: 10.1016/j.ijsu.2020.02.034. Epub 2020 Feb 26.
5
Emergence of Novel Coronavirus 2019-nCoV: Need for Rapid Vaccine and Biologics Development.2019新型冠状病毒(2019-nCoV)的出现:快速开发疫苗和生物制品的必要性。
Pathogens. 2020 Feb 22;9(2):148. doi: 10.3390/pathogens9020148.
6
Discovery of 4-chloro-2-(2,4-dichloro-6-methylphenoxy)-1-methyl-7-(pentan-3-yl)-1H-benzimidazole, a novel CRF receptor antagonist.新型促肾上腺皮质激素释放因子(CRF)受体拮抗剂4-氯-2-(2,4-二氯-6-甲基苯氧基)-1-甲基-7-(3-戊基)-1H-苯并咪唑的发现
Bioorg Med Chem. 2017 Mar 1;25(5):1556-1570. doi: 10.1016/j.bmc.2016.11.011. Epub 2016 Nov 8.
7
Synthetic and Medicinal Prospective of Structurally Modified Curcumins.结构修饰姜黄素的合成及药用前景
Curr Top Med Chem. 2017;17(2):148-161. doi: 10.2174/1568026616666160605050052.
8
Crystal structure refinement with SHELXL.使用SHELXL进行晶体结构精修。
Acta Crystallogr C Struct Chem. 2015 Jan;71(Pt 1):3-8. doi: 10.1107/S2053229614024218. Epub 2015 Jan 1.
9
SHELXT - integrated space-group and crystal-structure determination.SHELXT——集成空间群与晶体结构测定
Acta Crystallogr A Found Adv. 2015 Jan;71(Pt 1):3-8. doi: 10.1107/S2053273314026370. Epub 2015 Jan 1.
10
An overview of N-heterocyclic carbenes.N-杂环卡宾综述。
Nature. 2014 Jun 26;510(7506):485-96. doi: 10.1038/nature13384.