To Jennifer P C, Davis Ian W, Marengo Matthew S, Shariff Aabid, Baublite Catherine, Decker Keith, Galvão Rafaelo M, Gao Zhihuan, Haragutchi Olivia, Jung Jee W, Li Hong, O'Brien Brent, Sant Anagha, Elich Tedd D
Bayer Crop Science, Chesterfield, MO, United States.
GrassRoots Biotechnology, Durham, NC, United States.
Front Plant Sci. 2021 Oct 22;12:712179. doi: 10.3389/fpls.2021.712179. eCollection 2021.
Plant biotechnology traits provide a means to increase crop yields, manage weeds and pests, and sustainably contribute to addressing the needs of a growing population. One of the key challenges in developing new traits for plant biotechnology is the availability of expression elements for efficacious and predictable transgene regulation. Recent advances in genomics, transcriptomics, and computational tools have enabled the generation of new expression elements in a variety of model organisms. In this study, new expression element sequences were computationally generated for use in crops, starting from native Arabidopsis and maize sequences. These elements include promoters, 5' untranslated regions (5' UTRs), introns, and 3' UTRs. The expression elements were demonstrated to drive effective transgene expression in stably transformed soybean plants across multiple tissues types and developmental stages. The expressed transcripts were characterized to demonstrate the molecular function of these expression elements. The data show that the promoters precisely initiate transcripts, the introns are effectively spliced, and the 3' UTRs enable predictable processing of transcript 3' ends. Overall, our results indicate that these new expression elements can recapitulate key functional properties of natural sequences and provide opportunities for optimizing the expression of genes in future plant biotechnology traits.
植物生物技术性状提供了一种提高作物产量、控制杂草和害虫以及可持续地满足不断增长的人口需求的手段。开发植物生物技术新性状的关键挑战之一是能否获得用于有效和可预测的转基因调控的表达元件。基因组学、转录组学和计算工具的最新进展使得在多种模式生物中产生新的表达元件成为可能。在本研究中,从拟南芥和玉米的天然序列出发,通过计算生成了用于作物的新表达元件序列。这些元件包括启动子、5'非翻译区(5'UTR)、内含子和3'UTR。这些表达元件在稳定转化的大豆植株的多种组织类型和发育阶段中均能驱动有效的转基因表达。对表达的转录本进行了表征,以证明这些表达元件的分子功能。数据表明,启动子能精确起始转录本,内含子能有效剪接,3'UTR能实现转录本3'末端的可预测加工。总体而言,我们的结果表明,这些新的表达元件能够重现天然序列的关键功能特性,并为优化未来植物生物技术性状中的基因表达提供机会。