• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人源和疟原虫乳酸脱氢酶的结构、功能和热力学性质

Structure, Function, and Thermodynamics of Lactate Dehydrogenases from Humans and the Malaria Parasite .

机构信息

Department of Biochemistry, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, United States.

Department of Chemistry and Physical Sciences, Pace University, 1 Pace Plaza, New York, New York 10038, United States.

出版信息

Biochemistry. 2021 Nov 30;60(47):3582-3595. doi: 10.1021/acs.biochem.1c00470. Epub 2021 Nov 8.

DOI:10.1021/acs.biochem.1c00470
PMID:34747601
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8672703/
Abstract

Temperature adaptation is ubiquitous among all living organisms, yet the molecular basis for this process remains poorly understood. It can be assumed that for parasite-host systems, the same enzymes found in both organisms respond to the same selection factor (human body temperature) with similar structural changes. Herein, we report the existence of a reversible temperature-dependent structural transition for the glycolytic enzyme lactate dehydrogenase (LDH) from the malaria parasite (pfLDH) and human heart (hhLDH) occurring in the temperature range of human fever. This transition is observed for LDHs from psychrophiles, mesophiles, and moderate thermophiles in their operating temperature range. Thermodynamic analysis reveals unique thermodynamic signatures of the LDH-substrate complexes defining a specific temperature range to which human LDH is adapted and parasite LDH is not, despite their common mesophilic nature. The results of spectroscopic analysis combined with the available crystallographic data reveal the existence of an active center within pfLDH that imparts psychrophilic structural properties to the enzyme. This center consists of two pockets, one formed by the five amino acids (5AA insert) within the substrate specificity loop and the other by the active site, that mutually regulate one another in response to temperature and induce structural and functional changes in the Michaelis complex. Our findings pave the way toward a new strategy for malaria treatments and drug design using therapeutic agents that inactivate malarial LDH selectively at a specific temperature range of the cyclic malaria paroxysm.

摘要

温度适应在所有生物体中普遍存在,但这一过程的分子基础仍知之甚少。可以假设,对于寄生虫-宿主系统,两种生物体中发现的相同酶会对相同的选择因素(人体温度)产生相似的结构变化。在此,我们报告了疟原虫(pfLDH)和人心(hhLDH)糖酵解酶乳酸脱氢酶(LDH)存在可逆的温度依赖结构转变,该转变发生在人体发热的温度范围内。在其工作温度范围内,来自嗜冷菌、中温菌和中度嗜热菌的 LDH 都观察到这种转变。热力学分析揭示了 LDH-底物复合物的独特热力学特征,定义了一个特定的温度范围,人体 LDH 适应这个范围,而寄生虫 LDH 则不适应,尽管它们具有共同的嗜中性。光谱分析的结果与现有的晶体学数据相结合,揭示了 pfLDH 中存在一个活性中心,赋予了酶的低温结构特性。该中心由底物特异性环内的五个氨基酸(5AA 插入)形成的一个口袋和由活性位点形成的另一个口袋组成,它们相互调节,以响应温度并诱导米氏复合物的结构和功能变化。我们的发现为疟疾治疗和药物设计开辟了一条新途径,使用的治疗剂可以在周期性疟疾发作的特定温度范围内选择性地使疟原虫 LDH 失活。

相似文献

1
Structure, Function, and Thermodynamics of Lactate Dehydrogenases from Humans and the Malaria Parasite .人源和疟原虫乳酸脱氢酶的结构、功能和热力学性质
Biochemistry. 2021 Nov 30;60(47):3582-3595. doi: 10.1021/acs.biochem.1c00470. Epub 2021 Nov 8.
2
Structurally Linked Dynamics in Lactate Dehydrogenases of Evolutionarily Distinct Species.进化上不同物种乳酸脱氢酶的结构关联动力学
Biochemistry. 2017 May 16;56(19):2488-2496. doi: 10.1021/acs.biochem.7b00245. Epub 2017 May 4.
3
Genetic diversity of Plasmodium vivax and Plasmodium falciparum lactate dehydrogenases in Myanmar isolates.缅甸分离株中间日疟原虫和恶性疟原虫乳酸脱氢酶的遗传多样性。
Malar J. 2020 Feb 4;19(1):60. doi: 10.1186/s12936-020-3134-y.
4
Why is the Plasmodium falciparum hexose transporter a promising new drug target?为什么恶性疟原虫己糖转运蛋白是一个有前景的新型药物靶点?
Expert Opin Ther Targets. 2003 Oct;7(5):593-602. doi: 10.1517/14728222.7.5.593.
5
Structure and function of Plasmodium falciparum malate dehydrogenase: role of critical amino acids in co-substrate binding pocket.恶性疟原虫苹果酸脱氢酶的结构与功能:关键氨基酸在辅酶结合口袋中的作用。
Biochimie. 2009 Nov-Dec;91(11-12):1509-17. doi: 10.1016/j.biochi.2009.09.005. Epub 2009 Sep 20.
6
Plasmodium falciparum and Plasmodium vivax specific lactate dehydrogenase: genetic polymorphism study from Indian isolates.恶性疟原虫和间日疟原虫特异性乳酸脱氢酶:来自印度分离株的基因多态性研究。
Infect Genet Evol. 2014 Aug;26:313-22. doi: 10.1016/j.meegid.2014.06.004. Epub 2014 Jun 17.
7
The M18 aspartyl aminopeptidase of the human malaria parasite Plasmodium falciparum.人类疟原虫恶性疟原虫的M18天冬氨酰氨肽酶
J Biol Chem. 2007 Oct 19;282(42):30817-26. doi: 10.1074/jbc.M704938200. Epub 2007 Aug 20.
8
Production and characterization of monoclonal antibodies against substrate specific loop region of Plasmodium falciparum lactate dehydrogenase.针对恶性疟原虫乳酸脱氢酶底物特异性环区的单克隆抗体的制备与特性分析
Immunol Invest. 2014;43(6):556-71. doi: 10.3109/08820139.2014.892962. Epub 2014 Apr 4.
9
Temperature does matter-an additional dimension in kinase inhibitor development.温度很重要——激酶抑制剂研发的另一个维度。
FEBS J. 2021 May;288(10):3148-3153. doi: 10.1111/febs.15564. Epub 2020 Sep 26.
10
Mitochondrial type II NADH dehydrogenase of Plasmodium falciparum (PfNDH2) is dispensable in the asexual blood stages.恶性疟原虫(Plasmodium falciparum)的线粒体 II 型 NADH 脱氢酶(PfNDH2)在无性血期是可有可无的。
PLoS One. 2019 Apr 9;14(4):e0214023. doi: 10.1371/journal.pone.0214023. eCollection 2019.

引用本文的文献

1
Malate dehydrogenase in parasitic protozoans: roles in metabolism and potential therapeutic applications.寄生原生动物中的苹果酸脱氢酶:在代谢中的作用和潜在的治疗应用。
Essays Biochem. 2024 Oct 3;68(2):235-251. doi: 10.1042/EBC20230075.
2
Biochemical characteristics of patients with imported malaria.输入性疟疾患者的生化特征。
Front Cell Infect Microbiol. 2022 Nov 10;12:1008430. doi: 10.3389/fcimb.2022.1008430. eCollection 2022.
3
Enzyme-linked aptamer-based sandwich assay (ELASA) for detecting lactate dehydrogenase, a malarial biomarker.

本文引用的文献

1
Increase in temperature enriches heat tolerant taxa in Aedes aegypti midguts.温度升高会增加埃及伊蚊中肠内耐热分类群的数量。
Sci Rep. 2020 Nov 5;10(1):19135. doi: 10.1038/s41598-020-76188-x.
2
Conformational states dynamically populated by a kinase determine its function.构象状态由激酶动态填充,决定其功能。
Science. 2020 Oct 9;370(6513). doi: 10.1126/science.abc2754. Epub 2020 Oct 1.
3
The Inflection Point Hypothesis: The Relationship between the Temperature Dependence of Enzyme-Catalyzed Reaction Rates and Microbial Growth Rates.
用于检测疟疾生物标志物乳酸脱氢酶的基于酶联适配体的夹心测定法(ELASA)。
RSC Adv. 2022 Oct 14;12(45):29535-29542. doi: 10.1039/d2ra03796c. eCollection 2022 Oct 11.
拐点假说:酶促反应速率与微生物生长速率的温度依赖性关系。
Biochemistry. 2020 Sep 29;59(38):3562-3569. doi: 10.1021/acs.biochem.0c00530. Epub 2020 Sep 18.
4
Differences in thermal structural changes and melting between mesophilic and thermophilic dihydrofolate reductase enzymes.嗜温型和嗜热型二氢叶酸还原酶在热结构变化和熔融方面的差异。
Phys Chem Chem Phys. 2020 Sep 7;22(33):18361-18373. doi: 10.1039/d0cp02738c. Epub 2020 Aug 13.
5
Structural Evidence for Isoform-Selective Allosteric Inhibition of Lactate Dehydrogenase A.乳酸脱氢酶A同工型选择性变构抑制的结构证据
ACS Omega. 2020 May 27;5(22):13034-13041. doi: 10.1021/acsomega.0c00715. eCollection 2020 Jun 9.
6
Natural Selection Shapes Codon Usage in the Human Genome.自然选择塑造人类基因组中的密码子使用。
Am J Hum Genet. 2020 Jul 2;107(1):83-95. doi: 10.1016/j.ajhg.2020.05.011. Epub 2020 Jun 8.
7
Establishment of mesophilic-like catalytic properties in a thermophilic enzyme without affecting its thermal stability.在不影响热稳定性的情况下,在嗜热酶中建立类似嗜中温的催化特性。
Sci Rep. 2019 Jun 27;9(1):9346. doi: 10.1038/s41598-019-45560-x.
8
Structural determinants increasing flexibility confer cold adaptation in psychrophilic phosphoglycerate kinase.结构决定因素增加灵活性赋予嗜冷磷酸甘油酸激酶的耐寒性。
Extremophiles. 2019 Sep;23(5):495-506. doi: 10.1007/s00792-019-01102-x. Epub 2019 May 30.
9
Forces acting on codon bias in malaria parasites.疟原虫密码子偏性的作用力。
Sci Rep. 2018 Oct 29;8(1):15984. doi: 10.1038/s41598-018-34404-9.
10
Functional and Structural Resilience of the Active Site Loop in the Evolution of Plasmodium Lactate Dehydrogenase.疟原虫乳酸脱氢酶进化过程中活性位点环的功能与结构弹性
Biochemistry. 2018 Nov 13;57(45):6434-6442. doi: 10.1021/acs.biochem.8b00913. Epub 2018 Nov 2.