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拐点假说:酶促反应速率与微生物生长速率的温度依赖性关系。

The Inflection Point Hypothesis: The Relationship between the Temperature Dependence of Enzyme-Catalyzed Reaction Rates and Microbial Growth Rates.

机构信息

School of Science - Te Aka Ma̅tuatua, University of Waikato, Hamilton 3216, New Zealand.

Institute of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Worringerweg 1, D-52074 Aachen, Germany.

出版信息

Biochemistry. 2020 Sep 29;59(38):3562-3569. doi: 10.1021/acs.biochem.0c00530. Epub 2020 Sep 18.

Abstract

The temperature dependence of biological rates at different scales (from individual enzymes to isolated organisms to ecosystem processes such as soil respiration and photosynthesis) is the subject of much historical and contemporary research. The precise relationship between the temperature dependence of enzyme rates and those at larger scales is not well understood. We have developed macromolecular rate theory (MMRT) to describe the temperature dependence of biological processes at all scales. Here we formalize the scaling relationship by investigating MMRT both at the molecular scale (constituent enzymes) and for growth of the parent organism. We demonstrate that the inflection point () for the temperature dependence of individual metabolic enzymes coincides with the optimal growth temperature for the parent organism, and we rationalize this concordance in terms of the necessity for linearly correlated rates for metabolic enzymes over fluctuating environmental temperatures to maintain homeostasis. Indeed, is likely to be under strong selection pressure to maintain coordinated rates across environmental temperature ranges. At temperatures at which rates become uncorrelated, we postulate a regulatory catastrophe and organism growth rates precipitously decline at temperatures where this occurs. We show that the curvature in the plots of the natural log of the rate versus temperature for individual enzymes determines the curvature for the metabolic process overall and the curvature for the temperature dependence of the growth of the organism. We have called this "the inflection point hypothesis", and this hypothesis suggests many avenues for future investigation, including avenues for engineering the thermal tolerance of organisms.

摘要

生物在不同尺度(从单个酶到分离的生物体到生态系统过程,如土壤呼吸和光合作用)上的反应速率对温度的依赖性是历史和当代研究的主题。酶反应速率对温度的依赖性与较大尺度上的依赖性之间的确切关系还没有得到很好的理解。我们已经开发出了大分子速率理论(MMRT)来描述所有尺度上的生物过程的温度依赖性。在这里,我们通过研究分子尺度(组成酶)和母体生物生长的 MMRT,来确定这种缩放关系。我们证明,单个代谢酶的温度依赖性的拐点()与母体生物的最佳生长温度相吻合,我们根据代谢酶在波动的环境温度下保持内稳性所需的线性相关速率来合理化这种一致性。事实上,在维持协调的环境温度范围内的速率方面,可能会受到强烈的选择压力。在速率变得不相关的温度下,我们假设存在监管灾难,并且生物体的生长速率在发生这种情况的温度下急剧下降。我们表明,单个酶的速率对温度的自然对数的图的曲率决定了整体代谢过程的曲率以及生物体生长对温度依赖性的曲率。我们称之为“拐点假说”,这个假说为未来的研究提供了许多途径,包括对生物体的耐热性进行工程设计的途径。

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