• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种用于外推的提取工具?基于固相微萃取的二维、三维和小鼠黑色素瘤模型的代谢组学

One extraction tool for extrapolation? SPME-based metabolomics of 2D, 3D, and mouse melanoma models.

作者信息

Jaroch Karol, Taczyńska Paulina, Czechowska Marta, Bogusiewicz Joanna, Łuczykowski Kamil, Burlikowska Katarzyna, Bojko Barbara

机构信息

Department of Pharmacodynamics and Molecular Pharmacology, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń Poland, 85-089, Bydgoszcz, Poland.

出版信息

J Pharm Anal. 2021 Oct;11(5):667-674. doi: 10.1016/j.jpha.2021.03.005. Epub 2021 Mar 24.

DOI:10.1016/j.jpha.2021.03.005
PMID:34765281
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8572711/
Abstract

Solid phase microextraction (SPME) in combination with high-resolution mass spectrometry was employed for the determination of metabolomic profile of mouse melanoma growth within in vitro 2D, in vitro 3D, and in vivo models. Such multi-model approach had never been investigated before. Due to the low-invasiveness of SPME, it was possible to perform time-course analysis, which allowed building time profile of biochemical reactions in the studied material. Such approach does not require the multiplication of samples as subsequent analyses are performed from the very same cell culture or from the same individual. SPME already reduces the number of animals required for experiment; therefore, it is with good concordance with the 3Rs rule (replacement, reduction, and refinement). Among tested models, the largest number of compounds was found within the in vitro 2D cell culture model, while in vivo and in vitro 3D models had the lowest number of detected compounds. These results may be connected with a higher metabolic rate, as well as lower integrity of the in vitro 2D model compared to the in vitro 3D model resulting in a lower number of compounds released into medium in the latter model. In terms of in vitro-in vivo extrapolation, the in vitro 2D model performed more similar to in vivo model compared to in vitro 3D model; however, it might have been due to the fact that only compounds secreted to medium were investigated. Thus, in further experiments to obtain full metabolome information, the intraspheroidal assessment or spheroid dissociation would be necessary.

摘要

采用固相微萃取(SPME)结合高分辨率质谱法测定小鼠黑色素瘤在体外二维、体外三维和体内模型中的代谢组学特征。这种多模型方法此前从未被研究过。由于SPME的侵入性低,因此可以进行时间进程分析,从而构建所研究材料中生化反应的时间图谱。这种方法不需要增加样本数量,因为后续分析是在同一细胞培养物或同一个体上进行的。SPME已经减少了实验所需的动物数量;因此,它与3R原则(替代、减少和优化)高度一致。在测试的模型中,在体外二维细胞培养模型中发现的化合物数量最多,而在体内和体外三维模型中检测到的化合物数量最少。这些结果可能与较高的代谢率有关,也与体外二维模型相比体外三维模型的完整性较低有关,导致后者模型中释放到培养基中的化合物数量较少。就体外-体内外推而言,与体外三维模型相比,体外二维模型与体内模型的表现更为相似;然而,这可能是因为只研究了分泌到培养基中的化合物。因此,在进一步的实验中,为了获得完整的代谢组信息,有必要进行球体内评估或球体解离。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/825e1af142a2/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/fa86b998384f/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/c63378d311b2/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/292384c2d6cb/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/ddab0f5139fd/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/57c7857370e4/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/e7c442c80d27/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/825e1af142a2/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/fa86b998384f/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/c63378d311b2/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/292384c2d6cb/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/ddab0f5139fd/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/57c7857370e4/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/e7c442c80d27/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c171/8572711/825e1af142a2/gr6.jpg

相似文献

1
One extraction tool for extrapolation? SPME-based metabolomics of 2D, 3D, and mouse melanoma models.一种用于外推的提取工具?基于固相微萃取的二维、三维和小鼠黑色素瘤模型的代谢组学
J Pharm Anal. 2021 Oct;11(5):667-674. doi: 10.1016/j.jpha.2021.03.005. Epub 2021 Mar 24.
2
Translational Metabolomics of Head Injury: Exploring Dysfunctional Cerebral Metabolism with Ex Vivo NMR Spectroscopy-Based Metabolite Quantification头部损伤的转化代谢组学:基于体外核磁共振波谱的代谢物定量分析探索脑代谢功能障碍
3
Assessment of solid phase microextraction as a sample preparation tool for untargeted analysis of brain tissue using liquid chromatography-mass spectrometry.评估固相微萃取作为一种样品制备工具,用于使用液相色谱-质谱法对脑组织进行非靶向分析。
J Chromatogr A. 2021 Feb 8;1638:461862. doi: 10.1016/j.chroma.2020.461862. Epub 2021 Jan 2.
4
Systematic evaluation of solid-phase microextraction coatings for untargeted metabolomic profiling of biological fluids by liquid chromatography-mass spectrometry.系统评价固相微萃取涂层在液相色谱-质谱联用技术下对生物体液进行非靶向代谢组学分析的应用。
Anal Chem. 2011 Mar 15;83(6):1944-54. doi: 10.1021/ac102614v. Epub 2011 Feb 18.
5
Solid phase microextraction as a powerful alternative for screening of secondary metabolites in actinomycetes.固相微萃取作为一种强大的替代方法,用于筛选放线菌中的次生代谢产物。
J Mass Spectrom. 2019 Oct;54(10):823-833. doi: 10.1002/jms.4434. Epub 2019 Oct 18.
6
The use of solid phase microextraction for metabolomic analysis of non-small cell lung carcinoma cell line (A549) after administration of combretastatin A4.使用固相微萃取技术对服用考布他汀 A4 后非小细胞肺癌细胞系(A549)的代谢组学分析。
Sci Rep. 2019 Jan 23;9(1):402. doi: 10.1038/s41598-018-36481-2.
7
Analysis of extracellular metabolome by HS-SPME/GC-MS: Optimization and application in a pilot study to evaluate galactosamine-induced hepatotoxicity.采用 HS-SPME/GC-MS 分析细胞外代谢组:优化及在评估半乳糖胺诱导肝毒性的初步研究中的应用。
Toxicol Lett. 2018 Oct 1;295:22-31. doi: 10.1016/j.toxlet.2018.05.028. Epub 2018 May 28.
8
High-Throughput Solid-Phase Microextraction-Liquid Chromatography-Mass Spectrometry for Microbial Untargeted Metabolomics.用于微生物非靶向代谢组学的高通量固相微萃取-液相色谱-质谱联用技术
Methods Mol Biol. 2019;1859:133-152. doi: 10.1007/978-1-4939-8757-3_7.
9
Solid phase microextraction coupled with comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry for high-resolution metabolite profiling in apples: implementation of structured separations for optimization of sample preparation procedure in complex samples.固相微萃取结合全二维气相色谱飞行时间质谱用于苹果中高分辨率代谢物分析:结构化分离在复杂样品样品制备优化中的实现。
J Chromatogr A. 2012 Aug 17;1251:208-218. doi: 10.1016/j.chroma.2012.06.052. Epub 2012 Jun 23.
10
Metabolic profile of fish muscle tissue changes with sampling method, storage strategy and time.鱼肌肉组织的代谢特征会随采样方法、储存策略和时间而变化。
Anal Chim Acta. 2020 Nov 1;1136:42-50. doi: 10.1016/j.aca.2020.08.050. Epub 2020 Sep 1.

引用本文的文献

1
Biocompatibility of Hydraulic Calcium Silicate-Based Cement MTA Flow on Human Dental Pulp Stem Cells In Vitro.水硬性硅酸钙基水泥MTA Flow对人牙髓干细胞的体外生物相容性
J Funct Biomater. 2025 Jul 7;16(7):252. doi: 10.3390/jfb16070252.
2
Solid-phase microextraction: a fit-for-purpose technique in biomedical analysis.固相微萃取:生物医学分析中的一种适用技术。
Anal Bioanal Chem. 2022 Oct;414(24):7005-7013. doi: 10.1007/s00216-022-04138-9. Epub 2022 May 24.

本文引用的文献

1
Monitoring of the influence of long-term oxidative stress and ischemia on the condition of kidneys using solid-phase microextraction chemical biopsy coupled with liquid chromatography-high-resolution mass spectrometry.运用固相微萃取化学活检结合液相色谱-高分辨质谱法监测长期氧化应激和缺血对肾脏状况的影响。
J Sep Sci. 2020 May;43(9-10):1867-1878. doi: 10.1002/jssc.202000032. Epub 2020 Mar 10.
2
In Vivo Solid-Phase Microextraction for Sampling of Oxylipins in Brain of Awake, Moving Rats.在清醒、运动的大鼠脑组织中取样氧化脂类的体内固相微萃取。
Angew Chem Int Ed Engl. 2020 Feb 3;59(6):2392-2398. doi: 10.1002/anie.201909430. Epub 2019 Dec 12.
3
Measurement of Free Drug Concentration from Biological Tissue by Solid-Phase Microextraction: In Silico and Experimental Study.
固相微萃取法从生物组织中测量游离药物浓度:计算与实验研究。
Anal Chem. 2019 Jun 18;91(12):7719-7728. doi: 10.1021/acs.analchem.9b00983. Epub 2019 May 31.
4
Uncovering the anti-proliferation mechanism and bioactive compounds in red kidney bean coat against B16-F10 melanoma cells by metabolomics and network pharmacology analysis.通过代谢组学和网络药理学分析揭示红芸豆种皮抗 B16-F10 黑素瘤细胞的增殖机制和生物活性化合物。
Food Funct. 2019 Feb 20;10(2):912-924. doi: 10.1039/c8fo01738g.
5
The use of solid phase microextraction for metabolomic analysis of non-small cell lung carcinoma cell line (A549) after administration of combretastatin A4.使用固相微萃取技术对服用考布他汀 A4 后非小细胞肺癌细胞系(A549)的代谢组学分析。
Sci Rep. 2019 Jan 23;9(1):402. doi: 10.1038/s41598-018-36481-2.
6
Simultaneous untargeted and targeted metabolomics profiling of underivatized primary metabolites in sulfur-deficient barley by ultra-high performance liquid chromatography-quadrupole/time-of-flight mass spectrometry.利用超高效液相色谱-四极杆/飞行时间质谱对缺硫大麦中未衍生化的初级代谢产物进行非靶向和靶向同步代谢组学分析。
Plant Methods. 2018 Jul 24;14:62. doi: 10.1186/s13007-018-0329-0. eCollection 2018.
7
High-throughput analysis using non-depletive SPME: challenges and applications to the determination of free and total concentrations in small sample volumes.高通量分析使用非消耗性 SPME:挑战和应用于小体积样品中游离和总浓度的测定。
Sci Rep. 2018 Jan 18;8(1):1167. doi: 10.1038/s41598-018-19313-1.
8
Quantitative analysis of biofluid spots by coated blade spray mass spectrometry, a new approach to rapid screening.采用涂敷刀片喷雾质谱法对生物流体斑点进行定量分析,一种快速筛选的新方法。
Sci Rep. 2017 Nov 23;7(1):16104. doi: 10.1038/s41598-017-16494-z.
9
Metabolic Profiling of healthy and cancerous tissues in 2D and 3D.二维和三维空间中健康组织和癌变组织的代谢组学分析。
Sci Rep. 2017 Nov 10;7(1):15285. doi: 10.1038/s41598-017-15325-5.
10
Advances in Solid Phase Microextraction and Perspective on Future Directions.固相微萃取的进展及未来方向展望
Anal Chem. 2018 Jan 2;90(1):302-360. doi: 10.1021/acs.analchem.7b04502. Epub 2017 Dec 14.