Department of Oral Biology, University of Nebraska Medical Center, Lincoln, NE, USA.
The Eppley Institute for Research in Cancer and Allied Diseases, Fred & Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, NE, USA.
DNA Repair (Amst). 2021 Dec;108:103244. doi: 10.1016/j.dnarep.2021.103244. Epub 2021 Nov 2.
DNA Double strand breaks (DSBs) are highly hazardous to the cell, and are repaired predominantly via non-homologous end joining (NHEJ) and homologous recombination (HR). Using DSB-mimicking DNA templates, our proteomic studies identified a group of Sm core proteins of small nuclear ribonucleoproteins (snRNPs) as potential DSB-associated proteins. We further confirmed that these Sm proteins were recruited to laser-induced DNA damage sites, and co-localized with established DNA damage repair factors. Depletion of Sm-D3 or Sm-B induced accumulation of γ-H2AX, and impaired the repair efficiency of HR, but not NHEJ. Furthermore, disruption of Sm-D3 reduced the protein level of HR factors, especially RAD51 and CHK1, but caused no change in the expression of repair factors involved in NHEJ. Mechanistically, Sm-D3 proteins bound RAD51, suppressed the ubiquitination of RAD51, and mediated the stabilization of RAD51; Sm-D3 depletion particularly impacted the level of RAD51 and CHK1 on damaged chromatin. As such, our studies characterized a role of Sm proteins in HR repair, via a new mechanism that is distinct from their conventional functions in RNA processing and gene regulation, but consistent with their direct recruitment to DNA damage sites and association with repair factors.
DNA 双链断裂(DSBs)对细胞有很大的危害,主要通过非同源末端连接(NHEJ)和同源重组(HR)进行修复。使用 DSB 模拟 DNA 模板,我们的蛋白质组学研究鉴定了一组小核核糖核蛋白(snRNPs)的 Sm 核心蛋白作为潜在的 DSB 相关蛋白。我们进一步证实,这些 Sm 蛋白被募集到激光诱导的 DNA 损伤部位,并与已建立的 DNA 损伤修复因子共定位。Sm-D3 或 Sm-B 的耗竭导致 γ-H2AX 的积累,并损害 HR 的修复效率,但不影响 NHEJ。此外,Sm-D3 的破坏降低了 HR 因子的蛋白水平,特别是 RAD51 和 CHK1,但对参与 NHEJ 的修复因子的表达没有影响。在机制上,Sm-D3 蛋白结合 RAD51,抑制 RAD51 的泛素化,并介导 RAD51 的稳定;Sm-D3 耗竭特别影响受损染色质上 RAD51 和 CHK1 的水平。因此,我们的研究通过一种不同于其在 RNA 加工和基因调控中的传统功能的新机制,描述了 Sm 蛋白在 HR 修复中的作用,但与它们直接募集到 DNA 损伤部位和与修复因子的关联一致。