Division of Molecular Biochemistry, Rudolf Schönheimer Institute of Biochemistry, Medical Faculty, Leipzig University, 04103 Leipzig, Germany.
Department of Biology, Institute of Cell Biology, Heinrich Heine University Düsseldorf, 40225 Düsseldorf, Germany.
Int J Mol Sci. 2021 Oct 30;22(21):11803. doi: 10.3390/ijms222111803.
Adhesion G protein-coupled receptors (aGPCRs) form a structurally separate class of GPCRs with an unresolved evolutionary history and classification. Based on phylogenetic relations of human aGPCRs, nine families (A-G, L, V) were distinguished. Taking advantage of available genome data, we determined the aGPCR repertoires in all vertebrate classes. Although most aGPCR families show a high numerical stability in vertebrate genomes, the full repertoire of family E, F, and G members appeared only after the fish-tetrapod split. We did not find any evidence for new aGPCR families in vertebrates which are not present in the human genome. Based on ortholog sequence alignments, selection analysis clearly indicated two types of tetrapod aGPCRs: (i) aGPCR under strong purifying selection in tetrapod evolution (families A, B, D, L, V); and (ii) aGPCR with signatures of positive selection in some tetrapod linages (families C, E, G, F). The alignments of aGPCRs also allowed for a revised definition of reference positions within the seven-transmembrane-helix domain (relative position numbering scheme). Based on our phylogenetic cluster analysis, we suggest a revised nomenclature of aGPCRs including their transcript variants. Herein, the former families E and L are combined to one family (L) and GPR128/ADGRG7 forms a separate family (E). Furthermore, our analyses provide valuable information about the (patho)physiological relevance of individual aGPCR members.
黏附 G 蛋白偶联受体 (aGPCRs) 是一个结构上独立的 GPCR 家族,其进化历史和分类尚未解决。基于人类 aGPCRs 的系统发育关系,区分出了九个家族 (A-G、L、V)。利用现有基因组数据,我们确定了所有脊椎动物类群中的 aGPCR 谱。尽管大多数 aGPCR 家族在脊椎动物基因组中具有高度的数量稳定性,但家族 E、F 和 G 的完整成员谱仅在鱼类-四足动物分化后才出现。我们没有发现任何证据表明在人类基因组中不存在的新的 aGPCR 家族存在于脊椎动物中。基于直系同源序列比对,选择分析清楚地表明了两种类型的四足动物 aGPCR:(i) 在四足动物进化中受到强烈纯化选择的 aGPCR(家族 A、B、D、L、V);(ii) 在一些四足动物谱系中具有正选择特征的 aGPCR(家族 C、E、G、F)。aGPCR 的比对还允许对七跨膜螺旋域内的参考位置进行修订定义(相对位置编号方案)。基于我们的系统发育聚类分析,我们建议对 aGPCR 进行修订命名,包括其转录变体。在此,前家族 E 和 L 合并为一个家族 (L),GPR128/ADGRG7 形成一个单独的家族 (E)。此外,我们的分析提供了有关单个 aGPCR 成员的 (病理) 生理学相关性的有价值信息。