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重新审视黏附 GPCR 分类。

Revisiting the classification of adhesion GPCRs.

机构信息

Division of General Biochemistry, Rudolf Schönheimer Institute of Biochemistry, Medical Faculty, Leipzig University, Leipzig, Germany.

Division of Molecular Biochemistry, Rudolf Schönheimer Institute of Biochemistry, Medical Faculty, Leipzig University, Leipzig, Germany.

出版信息

Ann N Y Acad Sci. 2019 Nov;1456(1):80-95. doi: 10.1111/nyas.14192. Epub 2019 Jul 31.

Abstract

G protein-coupled receptors (GPCRs) are encoded by over 800 genes in the human genome. Motivated by different scientific rationales, the two classification systems that are mainly in use, the ABC and GRAFS systems, organize GPCRs according to their pharmacological features and phylogenetic relations, respectively. Within those systems, adhesion GPCRs (aGPCRs) constitute a group of over 30 mammalian homologs, most of which are still orphans with undefined activating signals and signal transduction properties. Previous efforts have further subdivided mammalian aGPCRs into nine subfamilies to indicate phylogenetic relationships. However, this subclassification scheme has shortcomings and inconsistencies that require attention. Here, we have reassessed the phylogenetic relationships of aGPCRs from vertebrate and invertebrate species. Our findings confirm that secretin receptor-like GPCRs most probably emerged from ancestral aGPCRs. We show that reassignment of several aGPCRs to families essentially requires input from functional data. Our analyses establish the need for introducing novel aGPCR subfamilies due to aGPCR sequences from invertebrate species that are not readily assignable to any existing subfamily. We conclude that the current classification systems ought to be updated to consider an unambiguous taxonomy of a hierarchically organized classification and pharmacological properties, and to accommodate phylogenetic affiliations between aGPCR genes within mammals and across the animal kingdom.

摘要

G 蛋白偶联受体 (GPCRs) 是人类基因组中超过 800 个基因编码的。受不同科学原理的驱动,目前主要使用的两种分类系统,ABC 系统和 GRAFS 系统,分别根据其药理学特征和系统发生关系来组织 GPCRs。在这些系统中,黏附 GPCRs(aGPCRs) 构成了一组超过 30 种哺乳动物同源物,其中大多数仍然是孤儿,没有定义的激活信号和信号转导特性。以前的研究工作进一步将哺乳动物 aGPCRs 细分为九个亚家族,以表明系统发生关系。然而,这种细分方案存在一些缺点和不一致之处,需要引起注意。在这里,我们重新评估了来自脊椎动物和无脊椎动物物种的 aGPCRs 的系统发生关系。我们的研究结果证实,分泌素受体样 GPCRs 很可能是从祖先 aGPCRs 中出现的。我们表明,对几个 aGPCRs 家族的重新分配基本上需要功能数据的输入。我们的分析表明,由于无脊椎动物物种的 aGPCR 序列不易分配到任何现有的亚家族,因此需要引入新的 aGPCR 亚家族。我们得出结论,目前的分类系统应该更新,以考虑到明确的分类学和药理学特性的分类,以及在哺乳动物和整个动物王国中 aGPCR 基因之间的系统发生联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/631d/6900090/6c8d953aa3ab/NYAS-1456-80-g001.jpg

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