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开发真菌异源表达平台,以探索和提高真菌生物多样性中天然产物的产量。

Developing fungal heterologous expression platforms to explore and improve the production of natural products from fungal biodiversity.

机构信息

State Key Laboratory of Microbial Technology, Microbial Technology Institute, Shandong University, No. 72 Binhai Road, Qingdao 266237, PR China.

Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, the Netherlands.

出版信息

Biotechnol Adv. 2022 Jan-Feb;54:107866. doi: 10.1016/j.biotechadv.2021.107866. Epub 2021 Nov 12.

Abstract

Natural products from fungi represent an important source of biologically active metabolites notably for therapeutic agent development. Genome sequencing revealed that the number of biosynthetic gene clusters (BGCs) in fungi is much larger than expected. Unfortunately, most of them are silent or barely expressed under laboratory culture conditions. Moreover, many fungi in nature are uncultivable or cannot be genetically manipulated, restricting the extraction and identification of bioactive metabolites from these species. Rapid exploration of the tremendous number of cryptic fungal BGCs necessitates the development of heterologous expression platforms, which will facilitate the efficient production of natural products in fungal cell factories. Host selection, BGC assembly methods, promoters used for heterologous gene expression, metabolic engineering strategies and compartmentalization of biosynthetic pathways are key aspects for consideration to develop such a microbial platform. In the present review, we summarize current progress on the above challenges to promote research effort in the relevant fields.

摘要

真菌来源的天然产物是生物活性代谢产物的重要来源,特别是在治疗药物开发方面。基因组测序表明,真菌中的生物合成基因簇(BGCs)数量远远超过预期。不幸的是,大多数 BGC 在实验室培养条件下是沉默的或几乎不表达的。此外,自然界中有许多真菌是不可培养的或不能进行遗传操作,这限制了从这些物种中提取和鉴定生物活性代谢物。为了快速探索大量的隐性真菌 BGC,需要开发异源表达平台,这将有助于在真菌细胞工厂中高效生产天然产物。宿主选择、BGC 组装方法、用于异源基因表达的启动子、代谢工程策略和生物合成途径的区室化是考虑开发这种微生物平台的关键方面。在本文综述中,我们总结了上述挑战的最新进展,以促进相关领域的研究工作。

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